prot_H-elongata_contig57475.13215.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57475.13215.1
Unique Nameprot_H-elongata_contig57475.13215.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: D8LDJ5_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ5_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 6.600e-120
Identity = 188/260 (72.31%), Postives = 211/260 (81.15%), Query Frame = 0
Query:    1 MSSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQLGEGSRDSWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRLDGRSGKANTMVAGVGRVGVETGDGGLGRGGGDEDDVALAIALS 260
            MSSLCGQHCINNLVQ A YSA DLA+IA ELD QER+HMLA G +TPDAL+FLAEESGNVDAAGNFSIQVLNTAL RLYG YLVS+GSESVG  ++TTG   EDAFVLNRH+HWVA+RSIGG YWDLNSMLD PTR+TTFALEAYLHQLR+DGYSVFVVRGD LP PA +  EGSRD WYRVKDLL+ SRG GKGSG A +TAATDVW+NSGPG RLDG      T   G G+ G ++G  G+       +D+ LA+A+S
Sbjct:    1 MSSLCGQHCINNLVQAASYSAADLADIALELDDQERQHMLAAGSDTPDALKFLAEESGNVDAAGNFSIQVLNTALKRLYGAYLVSAGSESVG-KLSTTGYDVEDAFVLNRHAHWVAVRSIGGAYWDLNSMLDNPTRITTFALEAYLHQLREDGYSVFVVRGDDLPPPATEPREGSRDCWYRVKDLLEVSRG-GKGSGGALNTAATDVWLNSGPGQRLDG-----GTTSKGPGKDGRDSGGAGMT----SAEDMQLAMAIS 249          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A836CJ83_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ83_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.060e-65
Identity = 106/183 (57.92%), Postives = 134/183 (73.22%), Query Frame = 0
Query:    2 SSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQ----LGEGSRDSWY 180
            SSLCGQHC+NNL+Q   ++A DLA+IAH LD +ER+ ML  G +TPDAL+F AE+SGNVD AGNFS+QVL+ ALT  YG+ L S+GSE V G ++TTG   E  FV NR +HW A+RS+GG YW+LNS L+ P  +T++ALEA LHQ R DGYSVFVVRG  LP P+ +       G+ + WY
Sbjct:   11 SSLCGQHCLNNLLQACIFTAPDLADIAHVLDAKERQLMLELGHSTPDALKFQAEDSGNVDEAGNFSLQVLSEALTLRYGLRLESAGSERVAGKLSTTGYDSEAGFVCNRQAHWFAVRSVGGRYWNLNSTLERPEWITSYALEATLHQYRLDGYSVFVVRGGTLPPPSTEGPYGSDAGNAEDWY 193          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A7S2SLM5_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLM5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.320e-52
Identity = 102/220 (46.36%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    2 SSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVR-GDPLPAPAR---QLGEGSRDSWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRL 217
            S+LCGQHC+NNL+Q   +S GDLA+IA E+DR ER+ ML  G  TP+AL+FLAE+SGNVD +GNFSIQVL  AL R + + L   G+ S+ G      L   DAF+ N+ +HW  +R + G+YW+LNSML+ P +V+ F L A+L QL+ DGY VF+V  G  LP P     + G G+   ++ V  L ++  G+  GS  A +    D W  +G G RL
Sbjct:   23 SALCGQHCLNNLLQGTYFSPGDLADIAAEMDRLERQMMLEMGDATPEALKFLAEDSGNVDESGNFSIQVLKRALERSHELVLDHVGATSLEGQ----DLLSHDAFICNKSNHWFTVRKLYGLYWNLNSMLERPEKVSDFYLSAFLMQLQADGYDVFIVSPGANLPDPPHGGPEAGMGAASCFHTVSSLSRS--GSTAGSSTAAAGEQKDPWAMAGEGQRL 236          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A7S1U677_9STRA (Ubiquitinyl hydrolase 1 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U677_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.460e-48
Identity = 93/193 (48.19%), Postives = 125/193 (64.77%), Query Frame = 0
Query:    1 MSSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQLGEGSRDSWYRVKDLLQASRGAG 193
            +++LCGQHC+NNL+    ++   LAE+A ELD +E E MLA G  T DA RF+A+ SGNVD AGNFSIQVLNTA++R +G+ LV S SE + G +       + AFVLN+  HW+ +R  G  + DLNSM D P  V+ F L A+LHQL  DGY++F V G+ LP P +    G    ++ +  LL+ S GAG
Sbjct:   13 LAALCGQHCLNNLLGGPYFTEFQLAEVAQELDAREAELMLAGGAGTEDARRFMAQPSGNVDEAGNFSIQVLNTAVSRSHGLSLVPSESEGLTGRVDADPSQFQ-AFVLNQSQHWITLRRYGDTWLDLNSMHDKPRVVSAFYLSAFLHQLVADGYNIFCVEGE-LPPPLQDPTMGDPSCFHVLASLLEGSGGAG 203          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A7S0SUA2_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUA2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.430e-41
Identity = 77/191 (40.31%), Postives = 114/191 (59.69%), Query Frame = 0
Query:    2 SSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQLGEGSRDSWYRVKDLLQASRGA 192
            SSLCGQHC+NNL+QE  +++ DLAEIA +LD +E +++  +  N  +  RF+ E SGNVD +GNFS+QVL  AL  L+ + L+S  SE   G +       E+ F++N   HW  IR I  ++W+LNS +  P +++ F L A+L QL  +G SVFV RG   P    +        WY + +L++ +  A
Sbjct:   12 SSLCGQHCLNNLLQEPYFTSIDLAEIAQQLDAKELQYLTEDNDNQMNINRFINEGSGNVDNSGNFSLQVLKEALKSLHNIDLISWTSEE--GRLDIIDPTIEEGFIINHSQHWYTIRKINDIWWNLNSTIQVPEKISPFYLSAFLSQLINEGSSVFVARGKIPPQKTSRGITSDNCKWYHIDELIKPTNNA 200          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A4D9CP47_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CP47_9STRA)

HSP 1 Score: 152 bits (385), Expect = 4.940e-41
Identity = 115/292 (39.38%), Postives = 149/292 (51.03%), Query Frame = 0
Query:    2 SSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVS------SGSESVGGNITTTGLACEDA--------FVLNRHSHWVAIRSIGGVYWDLNSMLDY-PTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPA---PARQLGEGSRD--SWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRLDGRSGKANTMVAGVGRVGVETGDGGLGR----------GGGDEDDVALAIALSLQQ 263
            SSLCGQH +N L+    +S  DLAEIA ELD +E E MLA G  T DA++FLAE+S NV+A+G FS+ VL  AL R   + L+       S   S GG       A E A        F++NR  HW A+R +G  +W+LNS L+  P  V  F L A+L  L  +GYSVF+VRG+ LP    P    G G RD   WYRV DL+   +  G G G         +W       RL GR       VAG G  G+  G                GG +E+++A  IA+SL++
Sbjct:   27 SSLCGQHALNALLIGPYFSPADLAEIAAELDAKEAELMLAAG-ETIDAMKFLAEDSENVNASGFFSVDVLRLALARFGAIELIPFQKISFSQPSSRGGGEGERDKAAEAAGDLTQELGFLVNRAEHWFALRRVGRRWWNLNSTLERGPEEVGRFYLSAFLEALVAEGYSVFLVRGEGLPERGYPEEGGGHGRRDIGMWYRVSDLVAGGQRRG-GDGEGGERGKRGLWG------RLTGRG----RDVAGEGTTGMGAGXXXXXXXXXXXXXXXXGGSEEEELARVIAMSLEE 306          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A6V2A425_9STRA (Ubiquitinyl hydrolase 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A425_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.110e-40
Identity = 92/223 (41.26%), Postives = 125/223 (56.05%), Query Frame = 0
Query:    4 LCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAE---GVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQ---LGEGSRDSWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRLDGR 220
            LCGQH +NNLVQ   +S G LAEIA +LD+ E  +M      G  + D +R +AE SGNVDA+GNFSI+VL +AL     + L +   + +   +  T +   + F+ NR SHW AIR I G YW+LNS  + P +++ F L A +  L+Q+GYSVF V  D LP P         G    W++ +DL++    A         T ATD W N G G RLDG+
Sbjct:   20 LCGQHALNNLVQACAFSPGMLAEIAQQLDQMELNYMAENDEGGTRSKDYIRRVAEGSGNVDASGNFSIEVLRSALLTQNNLSLPNIRQQGILDQMDITDI---EGFICNRESHWFAIRKINGRYWNLNSTKERPEQISHFRLAAEIEGLQQEGYSVFCVT-DALPPPCTTNEGRERGLPQYWWKEEDLVKDKTDA--------VTGATDPWKNVGSGMRLDGK 230          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A7S2LJI3_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJI3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.530e-40
Identity = 105/272 (38.60%), Postives = 145/272 (53.31%), Query Frame = 0
Query:    4 LCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAE---GVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAPARQ---LGEGSRDSWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRLDGRSGKANTMVAGVGRVGVETGDGGLGRGGGDEDDVALAIALSLQQDPPGGA 269
            LCGQH +NNLVQ   ++   LAEIA +LD+ E  +M      GV++ D L+ LAE SGNVD +GNFSI+VL +AL   Y + L +   + +     TT     D F+ NR +HW AIR I   YW+LNS L+ P  ++ F L A +  L+  GYSVF V  D LP P      + +G    W++ +DLL       KG  NA  T A D W + G G RLDG  GK +++ AG     +            +E+ + +A+  SL+Q P   A
Sbjct:   14 LCGQHALNNLVQANAFTPVSLAEIAGQLDQMELNYMANNNEGGVSSKDYLKRLAEGSGNVDESGNFSIEVLRSALLSRYNIELPNIRQQGLSKVEVTT----MDGFICNRSAHWFAIRKINDRYWNLNSTLERPEVISHFRLAAEVEALQNSGYSVFCVV-DSLPPPCTNEAMMDQGLPKYWWKEEDLL-------KGKTNAM-TRADDPWKDVGSGRRLDG--GKKSSVGAGQQSKPISEMS--------EEEMLQMAMEASLEQAPQNNA 262          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: A0A7S2A2Q1_TRICV (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2Q1_TRICV)

HSP 1 Score: 151 bits (382), Expect = 4.040e-40
Identity = 93/224 (41.52%), Postives = 123/224 (54.91%), Query Frame = 0
Query:    4 LCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAE---GVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLRQDGYSVFVVRGDPLPAP---ARQLGEGSRDSWYRVKDLLQASRGAGKGSGNAPSTAATDVWVNSGPGHRLDGRS 221
            LCGQH +NNLVQE  +SA  LAEIAH+LD  E  +M      G+ + + L  +AE SGNVD  GNFSI+VL  AL   Y + L +   + V      T +   + F+ NR SHW AIR I G YW+LNS  + P  ++ F L A +   ++ GYSVF V    LP P   ++    G    W++ +DL+       KG  +A  T A D W N G G RLDG+S
Sbjct:   20 LCGQHALNNLVQECVFSADALAEIAHQLDEMELTYMAQNNEGGIRSKEYLERVAEGSGNVDETGNFSIEVLRAALQNRYDMSLPNIAQQGVLDGKDVTDI---EGFICNRDSHWFAIRKINGRYWNLNSTKERPEFISQFRLAAEIQGFQEAGYSVFCVVDKKLPPPCITSQGRERGLPQYWWKEEDLV-------KGKADAI-TGANDPWRNVGGGMRLDGKS 232          
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Match: R1F2X8_EMIHU (Ubiquitinyl hydrolase 1 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F2X8_EMIHU)

HSP 1 Score: 150 bits (378), Expect = 1.570e-39
Identity = 102/277 (36.82%), Postives = 144/277 (51.99%), Query Frame = 0
Query:    2 SSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDALRFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGLACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFA----LEAYLHQLRQDGYSVFVVRGDPLPAPARQLGEGSRDSWYRV----KDLLQASRGAGKGSGNA-PSTAATDVWVNSGPGHRLDGRSGKANTMVAGVGRVGVETGDGGLGRGGGDEDDVALAIALSLQQDPPGGA 269
            ++LCGQHC+NNL+Q   ++AGDLA+IA  LD+QER+ ML  G+ T +A  F++E+S NVDA+GNFSIQVL+ AL  ++G+ L  S        + +     +  FVLNRHSHW  +R +   +W  NS    P R+T+      L + L  L  D ++VFVV+GD  P PA +       +W       +D  + +  +G   GNA P   A  V   SG G  L G    A   VA +                   ++  LA+ALSL Q+  G A
Sbjct:   11 AALCGQHCLNNLLQGPHFTAGDLADIATALDQQERKLMLEAGM-TAEARAFMSEDSSNVDASGNFSIQVLSQALQNVFGLALEDSRRPENRSLMQSPD--AQTGFVLNRHSHWYCLRKLNNQWWSCNSTQMAPERITSSGNFSGLSSELRNLASDNWTVFVVKGDRWPQPAPRNQGAPPSNWVDPASPPRDPNEPAEFSGSTFGNAAPRQEAPKVEAFSGQGRSLGGSKRPAPAEVADL------------------SEEEQLAMALSLSQELAGQA 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57475.13215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ5_ECTSI6.600e-12072.31Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ83_9STRA1.060e-6557.92Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SLM5_9STRA1.320e-5246.36Ubiquitinyl hydrolase 1 n=2 Tax=Rhizochromulina ma... [more]
A0A7S1U677_9STRA1.460e-4848.19Ubiquitinyl hydrolase 1 n=2 Tax=Phaeomonas parva T... [more]
A0A7S0SUA2_9STRA1.430e-4140.31Ubiquitinyl hydrolase 1 n=1 Tax=Chromulina nebulos... [more]
A0A4D9CP47_9STRA4.940e-4139.38Ubiquitinyl hydrolase 1 n=1 Tax=Nannochloropsis sa... [more]
A0A6V2A425_9STRA1.110e-4041.26Ubiquitinyl hydrolase 1 n=3 Tax=Ditylum brightwell... [more]
A0A7S2LJI3_9STRA3.530e-4038.60Ubiquitinyl hydrolase 1 n=1 Tax=Skeletonema marino... [more]
A0A7S2A2Q1_TRICV4.040e-4041.52Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Trieres... [more]
R1F2X8_EMIHU1.570e-3936.82Ubiquitinyl hydrolase 1 n=3 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01233JOSEPHINcoord: 145..164
score: 60.0
coord: 121..141
score: 28.57
coord: 57..76
score: 60.0
coord: 35..56
score: 36.36
NoneNo IPR availableGENE3D1.10.287.10coord: 18..61
e-value: 9.1E-49
score: 167.2
NoneNo IPR availableGENE3D3.90.70.40coord: 4..162
e-value: 9.1E-49
score: 167.2
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 2..162
e-value: 4.7E-45
score: 165.7
IPR006155Josephin domainPFAMPF02099Josephincoord: 2..160
e-value: 5.4E-41
score: 140.4
IPR006155Josephin domainPROSITEPS50957JOSEPHINcoord: 1..174
score: 22.269
IPR033865Machado-Joseph disease proteinPANTHERPTHR14159MACHADO-JOSEPH DISEASE PROTEIN 1 ATAXIN-3coord: 2..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57475contigH-elongata_contig57475:341..3394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57475.13215.1mRNA_H-elongata_contig57475.13215.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57475 323..3394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57475.13215.1 ID=prot_H-elongata_contig57475.13215.1|Name=mRNA_H-elongata_contig57475.13215.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MSSLCGQHCINNLVQEARYSAGDLAEIAHELDRQEREHMLAEGVNTPDAL
RFLAEESGNVDAAGNFSIQVLNTALTRLYGVYLVSSGSESVGGNITTTGL
ACEDAFVLNRHSHWVAIRSIGGVYWDLNSMLDYPTRVTTFALEAYLHQLR
QDGYSVFVVRGDPLPAPARQLGEGSRDSWYRVKDLLQASRGAGKGSGNAP
STAATDVWVNSGPGHRLDGRSGKANTMVAGVGRVGVETGDGGLGRGGGDE
DDVALAIALSLQQDPPGGADIVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
IPR033865Ataxin-3