prot_H-elongata_contig57093.13164.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig57093.13164.1
Unique Nameprot_H-elongata_contig57093.13164.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig57093.13164.1 vs. uniprot
Match: D7G918_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G918_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 7.180e-90
Identity = 169/296 (57.09%), Postives = 198/296 (66.89%), Query Frame = 0
Query:   32 TIGAKRASTGNGKDQVDNFPTEDWSLTPPEAFAPSNRESKRGKTLSELHRLVIMRHSSRLDDPILERQQKLKAASVTSGSE---IMDTGGINSLGLNARDSDDPLAVPWPDRALRPYDCPIVDNDLPARQAKELCQYGFGKDTLILCSPFRRCLQTAGVVARTLGVDSITVHLEFGERMDKVRKEMTEEMEHRAMRRAEESSRGLRDAPLPQPAFCYLPKAGMLEALGGGVRLQGIVGKQPPANESGVEAKERFTDTISNVRKDHLPTRKVMVVTHGDALNSAGESLASQIIFEGE 324
            TIGAKR S+ NG       P E+W L  PE FAPS RE      L   H L +MRHS+RLDD I ERQ+KL A +  SGS+           S GL + D D+  AVPWPDRALRPYD PIVD DLPARQAK L + G G  T+I+CSPFRRCLQTAGVVARTLGV S+TVHL+ GERMDKVRKE+ E         +EE S G        PAF YL +A M  ALG GV+L+GIVG+QPP  ESG+EAK+RF  TI+NVR++ L    V+VV HGD L +AGESLASQI+FE +
Sbjct:  499 TIGAKRMSSENGM----GSPAEEWILDAPEGFAPSKREK-----LQSEHPLAVMRHSARLDDAIFERQRKLGAMTAGSGSDEDVAKKAVSDGSKGLESCDGDELAAVPWPDRALRPYDSPIVDTDLPARQAKALGRLGMGSQTVIICSPFRRCLQTAGVVARTLGVASVTVHLQVGERMDKVRKEIAE-----LALDSEERSDGTLATKETVPAFSYLAEADMRAALGAGVQLEGIVGEQPPEEESGIEAKQRFIVTIANVREEQLRDSPVLVVAHGDTLGAAGESLASQIVFEAD 780          
BLAST of mRNA_H-elongata_contig57093.13164.1 vs. uniprot
Match: A0A6H5KJH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH9_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 2.080e-88
Identity = 169/296 (57.09%), Postives = 200/296 (67.57%), Query Frame = 0
Query:   32 TIGAKRASTGNGKDQVDNFPTEDWSLTPPEAFAPSNRESKRGKTLSELHRLVIMRHSSRLDDPILERQQKLKAASVTSGSE---IMDTGGINSLGLNARDSDDPLAVPWPDRALRPYDCPIVDNDLPARQAKELCQYGFGKDTLILCSPFRRCLQTAGVVARTLGVDSITVHLEFGERMDKVRKEMTEEMEHRAMRRAEESSRGLRDAPLPQPAFCYLPKAGMLEALGGGVRLQGIVGKQPPANESGVEAKERFTDTISNVRKDHLPTRKVMVVTHGDALNSAGESLASQIIFEGE 324
            TIGAKR S+ NG       P E+W L  PE FAPS    KRGK  SE H L +MRHS+RLDD I ERQ+ L A +  SGS+           S GL + D D+  AVPWPDRALRPYD PIVD DLPARQAK L + G G  T+I+CSPFRRCLQTAGVVARTLGV S+TVHL+ GERMDKVRKE+ E         +EE S G        PAF YL +A M  ALG GV+L+ I+G+QPP  ESG+EAK+RF  TI+ VR++ L    V+VV HGD L++AGESLASQI+FEG+
Sbjct:  496 TIGAKRMSSENGM----GSPAEEWILDSPEGFAPS----KRGKLQSE-HPLAVMRHSARLDDAIFERQRMLGAITAGSGSDEDVAKKAVSDGSKGLESGDGDELAAVPWPDRALRPYDPPIVDTDLPARQAKALGRLGMGSQTVIVCSPFRRCLQTAGVVARTLGVASVTVHLQVGERMDKVRKEIAE-----LALDSEERSDGTLATKEAVPAFSYLEEADMRAALGAGVQLERIIGEQPPEEESGIEAKQRFIATIAKVREEQLRDSPVLVVAHGDTLDAAGESLASQIVFEGQ 777          
BLAST of mRNA_H-elongata_contig57093.13164.1 vs. uniprot
Match: A0A835YJL4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJL4_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.310e-16
Identity = 76/206 (36.89%), Postives = 96/206 (46.60%), Query Frame = 0
Query:  137 WPDRALRPYDCPIVDNDLPARQAKELCQ--------YGFGKDTLI--------------------------LC---SPFRRCLQTAGVVARTLGVDSITVHLEFGERMDKVRKEMTEEMEHRAMRRAEESSR---GLRDAPLP------QPAFCYLPKAGMLEALGGGVRLQGIVGKQPPANESGVEAKERFTDTISNV-RKDHLP 295
            W DRA RPYD PIVD+   AR A  +          Y    D  +                          LC   SPFRRCLQTAG VAR  G   + VHL  GERMDKVR+E         +  AEE+ R      DAP P      + AF YL    M +ALG GV L  ++G++PP  ES ++AK R++  ++ + R   LP
Sbjct:  395 WTDRAARPYDTPIVDDGRAARAALAVLDSGALEGAWYSGASDATVWEMAAAGAPIGXXXXXXXXXXXXXXXLCIVSSPFRRCLQTAGHVARVFGCGVVHVHLGVGERMDKVRQECGPGT--LLVDPAEEAQRPDASASDAPPPAASSLRRVAFAYLTPEEMGDALGEGVALGTVLGERPPLTESAMQAKLRYSHVLARMCRGKELP 598          
BLAST of mRNA_H-elongata_contig57093.13164.1 vs. uniprot
Match: A0A812JSX5_9DINO (VAPB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812JSX5_9DINO)

HSP 1 Score: 55.5 bits (132), Expect = 9.570e-5
Identity = 32/79 (40.51%), Postives = 42/79 (53.16%), Query Frame = 0
Query:  137 WPDRALRPYDCPIVDNDLPARQAKELCQYGFGKDTL--------ILCSPFRRCLQTAGVVARTLGVDSITVHLEFGERM 207
            WPD   RPYD PI + +LP   A+ L      K++L        ++ SPFRRCLQTA +  R LG+  + V    GE M
Sbjct:   34 WPDAGQRPYDTPISNEELPLESAQVL------KESLPEGVAVCAVVSSPFRRCLQTAALAGRQLGLKMLHVDNRLGELM 106          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig57093.13164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G918_ECTSI7.180e-9057.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJH9_9PHAE2.080e-8857.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJL4_9STRA2.310e-1636.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A812JSX5_9DINO9.570e-540.51VAPB protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR16469FAMILY NOT NAMEDcoord: 80..316
IPR029033Histidine phosphatase superfamilySUPERFAMILY53254Phosphoglycerate mutase-likecoord: 157..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig57093contigH-elongata_contig57093:245..1216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig57093.13164.1mRNA_H-elongata_contig57093.13164.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig57093 245..1216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig57093.13164.1 ID=prot_H-elongata_contig57093.13164.1|Name=mRNA_H-elongata_contig57093.13164.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
AEEENEEEDENETGLRGSDGGPDLAGGKETGTIGAKRASTGNGKDQVDNF
PTEDWSLTPPEAFAPSNRESKRGKTLSELHRLVIMRHSSRLDDPILERQQ
KLKAASVTSGSEIMDTGGINSLGLNARDSDDPLAVPWPDRALRPYDCPIV
DNDLPARQAKELCQYGFGKDTLILCSPFRRCLQTAGVVARTLGVDSITVH
LEFGERMDKVRKEMTEEMEHRAMRRAEESSRGLRDAPLPQPAFCYLPKAG
MLEALGGGVRLQGIVGKQPPANESGVEAKERFTDTISNVRKDHLPTRKVM
VVTHGDALNSAGESLASQIIFEGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam