prot_H-elongata_contig56943.13148.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56943.13148.1
Unique Nameprot_H-elongata_contig56943.13148.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length353
Homology
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BLAST of mRNA_H-elongata_contig56943.13148.1 vs. uniprot
Match: A0A6H5K3N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 4.980e-40
Identity = 85/129 (65.89%), Postives = 94/129 (72.87%), Query Frame = 0 
Query:    1 QDDRTAFFFACEHCHKPVAEFLVDQRGVNVNEKDKPAGHSPLHRACIAGQTRDAKAAVAEGLVSWLLSEGDADANAADLAGRVPGEADLAREAPKLRPTPQAPGIRKMLEHARMGVAPGTPSVPAVAAG 129
            +DDRTAFFFACEHCH PVA FLV Q GV VN KDKP+GH+ LHRACIAGQTR+ KA   E L+SWLLS   ADA A DL GR+PG ADL+ EAP L+PT QAP I K LE AR G    TP+  A A G
Sbjct:   77 KDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTRE-KAQATE-LISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAIAKSLEDARSGGGVTTPAAAAPAPG 203
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BLAST of mRNA_H-elongata_contig56943.13148.1 vs. uniprot
Match: D7FHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR2_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 7.840e-39
Identity = 79/115 (68.70%), Postives = 87/115 (75.65%), Query Frame = 0 
Query:    1 QDDRTAFFFACEHCHKPVAEFLVDQRGVNVNEKDKPAGHSPLHRACIAGQTRDAKAAVAEGLVSWLLSEGDADANAADLAGRVPGEADLAREAPKLRPTPQAPGIRKMLEHARMG 115
            +DDRTAFFFACEHCH PVA FLV Q GV VN KDKP+GH+ LHRACIAGQTR+ KA   E L+SWLLS   AD  A DL GR+PG ADL+ EAP L+PT QAP I K LE AR G
Sbjct:   26 KDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTRE-KAQATE-LISWLLSSAKADTKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSG 138
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56943.13148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3N5_9PHAE4.980e-4065.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHR2_ECTSI7.840e-3968.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 2..32
e-value: 0.56
score: 19.3
coord: 37..76
e-value: 210.0
score: 10.1
NoneNo IPR availablePFAMPF13637Ank_4coord: 4..56
e-value: 8.9E-7
score: 29.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..97
e-value: 1.2E-12
score: 49.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..84
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 2..84
score: 9.728

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56943contigH-elongata_contig56943:388..1948 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56943.13148.1mRNA_H-elongata_contig56943.13148.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56943 388..1948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56943.13148.1 ID=prot_H-elongata_contig56943.13148.1|Name=mRNA_H-elongata_contig56943.13148.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=353bp
QDDRTAFFFACEHCHKPVAEFLVDQRGVNVNEKDKPAGHSPLHRACIAGQ
TRDAKAAVAEGLVSWLLSEGDADANAADLAGRVPGEADLAREAPKLRPTP
QAPGIRKMLEHARMGVAPGTPSVPAVAAGAVGGSVTFHDTVAPRLSSPSR
VAERAAALASKTAPVLSAPTPAVVGSGVSSGTTPAFEAQAKAKAKASASP
GLKAPSSSSPPRKAAENPDASSPPSSPPWNVKLRPGGVKPRSERGHPATA
SSVPAERGGRVRVTPSAALAEKKKTPVTKQYPYGQKKASGSSMPSSGNGP
VAPSSAPLGRFPRQAAGIPTSDTVAPSNSATGASAAAVIGASHGPKASAL
AAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom