prot_H-elongata_contig5684.13135.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5684.13135.1
Unique Nameprot_H-elongata_contig5684.13135.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length234
Homology
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BLAST of mRNA_H-elongata_contig5684.13135.1 vs. uniprot
Match: D7G5R7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R7_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 2.290e-51
Identity = 106/223 (47.53%), Postives = 139/223 (62.33%), Query Frame = 0 
Query:    1 QVSWGVKPNTYGWDAPPLAFITMPKGERDAPNDPDDR-APNVFGNSRKIPPRITAIAHHVRKGGGKPRMLLVPLGELSIYRAFFSDRVYEISEEQSAHLHAALLEAFAMECDPENIIDDEMECFLSVDPRTAPLILETLVAAYQASTSVQTGSTDGNA------GISSDDEAVHPEVELVG------------QGLENDGVSRGTLTEE-------HATEVFR 197
            QVSWGV P++YG   PP+AF+ MPKG+     + D +  P VFGNSRKIPP+I++IAH+VR+ GGKPRMLL+PLGEL++YRAFFSDRV+E+S  QS  LHAAL+ +  ++C    I+  E +CFL  DPRT+PL L+TLVAAY+ S +  T S  G A       +++D  A      L G              ++ND    G  +EE       HATEVFR
Sbjct:  222 QVSWGVPPSSYGSGTPPIAFMPMPKGKEVDQGETDAKNVPQVFGNSRKIPPQISSIAHYVRRSGGKPRMLLLPLGELAVYRAFFSDRVFEVSPTQSEKLHAALVASSMLDCSTGRIVAGEKQCFLVQDPRTSPLALDTLVAAYEESLARSTTSASGAAIAVNDTSLAADSGAPQLSTRLQGGXXXXXXXXXXXXXVQNDPRFLGAASEETPFMTTAHATEVFR 444
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BLAST of mRNA_H-elongata_contig5684.13135.1 vs. uniprot
Match: A0A6H5JTX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX7_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.600e-40
Identity = 96/223 (43.05%), Postives = 123/223 (55.16%), Query Frame = 0 
Query:    1 QVSWGVKPNTYGWDAPPLAFITMPKGERDAPNDPDDR-APNVFGNSRKIPPRITAIAHHVRKGGGKPRMLLVPLGELSIYRAFFSDRVYEISEEQSAHLHAALLEAFAMECDPENIIDDEMECFLSVDPRTAPLILETLVAAYQASTSVQTGSTDGNA------GISSDDEAVH------------PEVELVGQGLENDGVSRGTLTEE-------HATEVFR 197
            QVSWG  P++YG   PP+AF+ MPKGE     + D +  P VFGNSRKIPP+I++IAH VR+ GGKPRMLL+PLGEL++YRAFFSDRV+E+   Q +                      E  CFL  DPR +PL L+TLV AY+ S +  T S+ G A       +++D  A              P  +  G G +ND    G  +EE       HATEVFR
Sbjct:  283 QVSWGAPPSSYGAGTPPIAFMPMPKGEEVDQGETDAKNVPQVFGNSRKIPPQISSIAHSVRRSGGKPRMLLLPLGELAVYRAFFSDRVFEVGVCQCS---------------------GERRCFLVQDPRMSPLALDTLVTAYEESLARTTSSSSGAAIAVNDTSLAADSGAPQLSTRLEGGGAPLPSAQQQGGGFQNDPRFLGAASEETPLMTTAHATEVFR 484
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5684.13135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5R7_ECTSI2.290e-5147.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTX7_9PHAE5.600e-4043.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5684contigH-elongata_contig5684:116..2908 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5684.13135.1mRNA_H-elongata_contig5684.13135.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5684 116..2908 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5684.13135.1 ID=prot_H-elongata_contig5684.13135.1|Name=mRNA_H-elongata_contig5684.13135.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp
QVSWGVKPNTYGWDAPPLAFITMPKGERDAPNDPDDRAPNVFGNSRKIPP
RITAIAHHVRKGGGKPRMLLVPLGELSIYRAFFSDRVYEISEEQSAHLHA
ALLEAFAMECDPENIIDDEMECFLSVDPRTAPLILETLVAAYQASTSVQT
GSTDGNAGISSDDEAVHPEVELVGQGLENDGVSRGTLTEEHATEVFRELL
NVAWGEHELSADLVGLWESWMWRSCGYRCTPGP*
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