prot_H-elongata_contig56694.13119.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56694.13119.1
Unique Nameprot_H-elongata_contig56694.13119.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56694.13119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 14..27
score: 48.67
coord: 59..72
score: 48.78
NoneNo IPR availablePANTHERPTHR46662:SF10coord: 1..74
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 1..74
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..74
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..74
e-value: 2.3E-26
score: 94.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 13..72
e-value: 6.1E-9
score: 35.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56694contigH-elongata_contig56694:1073..3503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56694.13119.1mRNA_H-elongata_contig56694.13119.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56694 1073..3503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56694.13119.1 ID=prot_H-elongata_contig56694.13119.1|Name=mRNA_H-elongata_contig56694.13119.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
TGPIPNELGKLTALTTLDLRGNQLSGPIPNELGKLTALTTLDLRLNQLNG
PIPNVLGKLTALKTLDLGGNQLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt