prot_H-elongata_contig56664.13113.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56664.13113.1
Unique Nameprot_H-elongata_contig56664.13113.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length211
Homology
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: D7FI64_ECTSI (Tim17 homolog, mitochondrial inner membrane protein of TIM23 complex n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI64_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 7.480e-102
Identity = 156/213 (73.24%), Postives = 173/213 (81.22%), Query Frame = 0
Query:    4 SLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADPGGAGAGEALGVP---RSVGLAPPLPPTGAPGGYRPMGAGGQMDSSATRSHDVVTGTGIDTGARFEDTLATHDPFASNAGDRYLENAGGVR----SAEGATGGTEKRGWIGRLLGRGG 209
            ++ YRAPVLGGNFAVWGALFS+CDCSLVAVRHKEDAWNPILSGAATGGILALRAGP+TAAKNA+VGG LLA IEGMGIL++R MAQ E PP+EA     GAG  LG P   R +GLAPPLPP GAP GYRPMG GG++DSSATRSHDVVTG+G +TG+RFEDTLAT DPFASN GDRYLE     R    +A  A  G E RGW GR++GRGG
Sbjct:   50 AVMYRAPVLGGNFAVWGALFSVCDCSLVAVRHKEDAWNPILSGAATGGILALRAGPRTAAKNAVVGGALLAVIEGMGILLSRYMAQVEPPPMEAGGDAGGAGGGLGAPQAPRPLGLAPPLPPVGAPAGYRPMGDGGEVDSSATRSHDVVTGSGFETGSRFEDTLATQDPFASNTGDRYLEGGAAPRGAGDAAAAAAEGAESRGWFGRMIGRGG 262          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A836CAQ4_9STRA (Tim17-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 7.560e-58
Identity = 117/216 (54.17%), Postives = 146/216 (67.59%), Query Frame = 0
Query:    3 ASLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQ---NELPPLEADPGGAGAGEALGVPRSVGLAPPLPPTGAPGGYRPMGAGGQ-----MDSSATRSHDVVTGTGIDTGARFEDTLATHDPFASNAGDRYLENAGGVRSAEGATGGTEKRGWIGRLLGRGGK 210
            +++K RAPVLGGNFAVWG LF+ CDC++ A+R KED WN I SGAATGGILALRAGPKTAAKNALVGGVLLA IEGMGI ++R+ AQ    ++P +  + GGA   E  G P+   LAPP+P  GA GG    GA G+     +D SA R  DV++G+G DT +R+ D  A  DP+A++ G   +  AGG  +  GA     KRG+ G L GRGGK
Sbjct:   51 SAVKARAPVLGGNFAVWGGLFACCDCTMAALRRKEDPWNSIASGAATGGILALRAGPKTAAKNALVGGVLLALIEGMGIGLSRMFAQMKPEDMPAILQEGGGAAPDE--GGPKQRALAPPIP-FGAHGG----GAPGRRHDDAVDPSAPRQSDVMSGSGFDTDSRYADPFAQADPYATSGG--LVPEAGGAGA--GAPEAPPKRGFFGGLFGRGGK 255          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A8J2SJP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJP6_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.970e-39
Identity = 81/124 (65.32%), Postives = 93/124 (75.00%), Query Frame = 0
Query:    5 LKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEA--DPGGAGAGEALGVPRSVGLAPPLP-PTGA 125
            ++ RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGPK A KNALVGGVLLA IEG+GILIT++MA    PP+ +  D    GA   L  P   GLAPP+  PTGA
Sbjct:   54 VRVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA----PPMASKDDLKHGGADPTL-PPTQPGLAPPVAFPTGA 172          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: F0Y463_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y463_AURAN)

HSP 1 Score: 137 bits (344), Expect = 7.000e-38
Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 0
Query:    5 LKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMA 88
            +K RAPV+GGNFAVWG LF+  DCSLVAVRHKED WN IL+GAATGG+LA RAGPK A KNALVGGVLLA IEG+GILIT++MA
Sbjct:   48 VKVRAPVVGGNFAVWGGLFACFDCSLVAVRHKEDPWNSILAGAATGGVLAARAGPKAAGKNALVGGVLLALIEGLGILITKMMA 131          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A6S8D9L3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D9L3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 8.440e-38
Identity = 74/118 (62.71%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    5 LKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEA-DPGGAGAGEALGVPRSVGLAPPLP 121
            ++ RAP++GGNFAVWG LF++ DCSL AVR KED WN IL+GAATGG+LA RAGPK AAKNA+VGG+LLA IEG+GILIT+  A    PP+ + D    G G   G P  VGLAPP+P
Sbjct:   55 MQVRAPIVGGNFAVWGGLFAVFDCSLSAVRQKEDPWNSILAGAATGGVLAARAGPKAAAKNAVVGGILLALIEGLGILITKAFA----PPVPSKDDLKHGDG---GAPAQVGLAPPIP 165          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A7S2UEF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEF5_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.240e-33
Identity = 66/119 (55.46%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 ARASLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADPGGAGAGEALGVPRSVGLAPP 119
            A +++  R PVLGG FAVWG +F+ CDCSL A+R KED WN I+SGAATGG+LA RAGPK  A  A+VGGVLLA IEGMGI+ T +++     P  A P   G  +    P S GL+PP
Sbjct:   21 ALSAMSARGPVLGGQFAVWGGVFACCDCSLTAIRQKEDPWNSIMSGAATGGVLAARAGPKAMASAAVVGGVLLALIEGMGIMFTSMLS-----PDLASPEMMGLPDPTAPPTSAGLSPP 134          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A1Z5KI64_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI64_FISSO)

HSP 1 Score: 127 bits (318), Expect = 7.070e-33
Identity = 76/158 (48.10%), Postives = 94/158 (59.49%), Query Frame = 0
Query:    8 RAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADPGGAGAGEALGVPRSVGLAPPLP-----PTGAPGGYRPMGAGGQMDSSATRSHDVVTGTGIDTGARF 160
            R+PVLGG FAVWG LF+ CDC+L AVR KED WN I+SGAATGGILA RAGP+ AA  A+VGGVLLA IEGMGI+I+R +A    PP   D   A   +    P   GL P  P        +P    P     + D S T S +  T +   +G+++
Sbjct:   59 RSPVLGGQFAVWGGLFACCDCTLTAVRQKEDPWNSIISGAATGGILAARAGPRAAASAAVVGGVLLALIEGMGIMISRALAPA--PPTAEDYERAMQQDVTAPPTMGGLMPRNPFMSSASDASPPASAPSQPYMETDGSTTFSKETTTSSNDSSGSKW 214          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A7S0CAZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAZ1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.670e-32
Identity = 67/117 (57.26%), Postives = 79/117 (67.52%), Query Frame = 0
Query:    8 RAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADPGGAGAGEALGVPRSVGLAPPLPPTG 124
            RAPVLGG FAVWG +F+ CDCSL A+R KED WN I+SGA TGGILA RAGP+  A +A VGGVLLA IEGMGI+ T++M      P+  D  GA   +    P S GLA    P+G
Sbjct:    3 RAPVLGGQFAVWGGIFACCDCSLTAMRQKEDPWNSIVSGALTGGILASRAGPRAMASSAAVGGVLLALIEGMGIMFTKMMGAPTSQPMP-DGQGAPVVDITAPPTSGGLALRPSPSG 118          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A2H9TJ02_9FUNG (Uncharacterized protein n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TJ02_9FUNG)

HSP 1 Score: 123 bits (308), Expect = 3.780e-32
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 0
Query:    3 ASLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADP 99
            +S+K RAPVLGGNFA+WGA FS  DC+L+A+R +ED WN I+SGA TGG+LA R GP  A ++A+VGG+LLA IEGMGI I RL A+   P     P
Sbjct:   56 SSVKQRAPVLGGNFAIWGATFSSFDCALIALRQREDPWNSIISGALTGGVLAARGGPGAAGRSAIVGGILLALIEGMGIAINRLFAEEYRPANRLSP 152          
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Match: A0A7S3AY71_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY71_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 4.250e-32
Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 0
Query:    4 SLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATGGILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPP 94
            ++K RAP++GGNFAVWG LFS  DCSLVA+R KED WN I+SGAATGG+LA R G + A ++A VGGVLLA IEG+ I +T++MA +  PP
Sbjct:   68 AVKARAPIIGGNFAVWGGLFSTFDCSLVAIRRKEDPWNSIISGAATGGVLAARGGWRAAGRSAAVGGVLLAMIEGLNIFLTKMMADSSAPP 158          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56664.13113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI64_ECTSI7.480e-10273.24Tim17 homolog, mitochondrial inner membrane protei... [more]
A0A836CAQ4_9STRA7.560e-5854.17Tim17-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A8J2SJP6_9STRA1.970e-3965.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y463_AURAN7.000e-3878.57Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6S8D9L3_9STRA8.440e-3862.71Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UEF5_9STRA4.240e-3355.46Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5KI64_FISSO7.070e-3348.10Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S0CAZ1_9STRA1.670e-3257.26Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A2H9TJ02_9FUNG3.780e-3259.79Uncharacterized protein n=1 Tax=Paramicrosporidium... [more]
A0A7S3AY71_9EUKA4.250e-3262.64Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 4..72
e-value: 1.2E-19
score: 70.7
NoneNo IPR availablePANTHERPTHR10485:SF0AT05822P-RELATEDcoord: 2..93
NoneNo IPR availablePANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 2..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..210
NoneNo IPR availableTMHMMTMhelixcoord: 66..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56664contigH-elongata_contig56664:2360..2992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56664.13113.1mRNA_H-elongata_contig56664.13113.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56664 2360..2992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56664.13113.1 ID=prot_H-elongata_contig56664.13113.1|Name=mRNA_H-elongata_contig56664.13113.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp
ARASLKYRAPVLGGNFAVWGALFSICDCSLVAVRHKEDAWNPILSGAATG
GILALRAGPKTAAKNALVGGVLLAFIEGMGILITRLMAQNELPPLEADPG
GAGAGEALGVPRSVGLAPPLPPTGAPGGYRPMGAGGQMDSSATRSHDVVT
GTGIDTGARFEDTLATHDPFASNAGDRYLENAGGVRSAEGATGGTEKRGW
IGRLLGRGGK*
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