prot_H-elongata_contig56442.13092.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56442.13092.1
Unique Nameprot_H-elongata_contig56442.13092.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
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BLAST of mRNA_H-elongata_contig56442.13092.1 vs. uniprot
Match: A0A6H5KLQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.010e-49
Identity = 81/104 (77.88%), Postives = 94/104 (90.38%), Query Frame = 0 
Query:    8 QHTVCTRRSGRKTLEGGVRHEDGVLLVPDCRKLRQEIVRSTCMDPAGAIRPDYVAYAGGAPVFLDGAPLGIFCVFSRRTLKDIGWSVHHTAVLRGLVDAASTEV 111
            QH VC  R GRK+L+GGVR+EDGVLLVPDCRKLRQEIVRSTCMDPAG++RPDYVAY G AP+++DGAPLG FCVFSRRTL+D+GW+ HHT VLRGL DAA+TE+
Sbjct:  916 QHAVCAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVG-APIYVDGAPLGTFCVFSRRTLRDLGWTAHHTIVLRGLADAAATEI 1018
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BLAST of mRNA_H-elongata_contig56442.13092.1 vs. uniprot
Match: D7FXI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 3.490e-49
Identity = 81/104 (77.88%), Postives = 93/104 (89.42%), Query Frame = 0 
Query:    8 QHTVCTRRSGRKTLEGGVRHEDGVLLVPDCRKLRQEIVRSTCMDPAGAIRPDYVAYAGGAPVFLDGAPLGIFCVFSRRTLKDIGWSVHHTAVLRGLVDAASTEV 111
            QH VC  R GRK+L+ GVR+EDGVLLVPDCRKLRQEIVRSTCMDPAG++RPDYVAY G AP+++DGAPLG FCVFSRRTLKD+GW+ HHT VLRGL DAA+TE+
Sbjct:  888 QHAVCAPRLGRKSLDAGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVG-APIYVDGAPLGTFCVFSRRTLKDLGWTAHHTVVLRGLADAAATEM 990
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56442.13092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLQ0_9PHAE1.010e-4977.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXI9_ECTSI3.490e-4977.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56442contigH-elongata_contig56442:245..1350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56442.13092.1mRNA_H-elongata_contig56442.13092.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56442 245..1350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56442.13092.1 ID=prot_H-elongata_contig56442.13092.1|Name=mRNA_H-elongata_contig56442.13092.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MCVYPCPQHTVCTRRSGRKTLEGGVRHEDGVLLVPDCRKLRQEIVRSTCM
DPAGAIRPDYVAYAGGAPVFLDGAPLGIFCVFSRRTLKDIGWSVHHTAVL
RGLVDAASTEVSCFGCTKN*
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