prot_H-elongata_contig56424.13088.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56424.13088.1
Unique Nameprot_H-elongata_contig56424.13088.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: A0A6H5KV09_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV09_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 4.560e-54
Identity = 90/174 (51.72%), Postives = 114/174 (65.52%), Query Frame = 0
Query:    1 MFNEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIAS-----------------------DGYDGLGRQGVDLLGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYLR 151
            M+ +PW IPG+IEAEYYD GG GV F++ +       STLR+PD V V EA+SNP +GH+VG W  GEW+AFT+R ++  +W+V AS+AS                       DG +GLG  GVDLL GPL    TGSWEAFE   KE+V+VPEG HRVLFCAD G+FN+++LR
Sbjct:  463 MYGDPWVIPGFIEAEYYDYGGNGVSFYKNSPELFYGDSTLRLPDAVGVYEADSNPYNGHYVGYWSTGEWVAFTARADEAAFWDVGASVASGLDGTTVQFRILVNATNCSSAATDGLNGLGDTGVDLLNGPLFAGYTGSWEAFEMVYKEEVYVPEGTHRVLFCADDGIFNMNFLR 636          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: A0A537LUF1_9BACT (Carbohydrate-binding protein n=2 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537LUF1_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 6.820e-17
Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = 0
Query:    5 PWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHV-GNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQGVD--LLGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYLR 151
            PWAIPG ++AE +D+GG GV +H+TT  +  +    RM   VD+I       +G +V  N+  GEWL +T      G + +E  ++S       R  +D   + G LS+  TGSW  F+      V +  G H +   AD   FNLD +R
Sbjct:  746 PWAIPGVVQAENFDVGGEGVAYHDTTPGN--QGGQYRMDVDVDIIA-----DNGRYVINNFQTGEWLEYTINVTATGVYRIEVLVSSQFSASRFRMALDGQNVTGSLSVPNTGSWHTFQWVGASGVGLTMGLHVLRVYADQQYFNLDAIR 888          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: UPI0015EF858A (glycosyl hydrolase n=1 Tax=Halorhabdus sp. FL145 TaxID=2750670 RepID=UPI0015EF858A)

HSP 1 Score: 85.5 bits (210), Expect = 1.780e-16
Identity = 54/150 (36.00%), Postives = 78/150 (52.00%), Query Frame = 0
Query:    8 IPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQGVDLLG----GPLSLAATGSWEAF-EHPLKEDVWVPEGDHRVLFCADTGMFNLDYLRF 152
            IPG IEAEY+D GG GV +HET+ ++         P  VD+ EA       + +G    GEWL ++   E    +++  S+AS   +G G   +++ G    G + +  TGSW  + E    E V + EGDH V   AD G +N DY+RF
Sbjct: 1033 IPGQIEAEYFDEGGEGVSYHETSENNQAGADYRDHP--VDIGEASGG---NYTIGYIPGGEWLEYSVTVESTAEYDIIVSVAS--AEGGGPVHIEVDGEDVTGSIDVPNTGSWTGYTEVTGAEGVELEEGDHIVRVVADGGAWNFDYMRF 1175          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: UPI00178C79D5 (DUF5010 C-terminal domain-containing protein n=1 Tax=Halorubrum sp. T3 TaxID=1194088 RepID=UPI00178C79D5)

HSP 1 Score: 83.2 bits (204), Expect = 9.950e-16
Identity = 51/153 (33.33%), Postives = 83/153 (54.25%), Query Frame = 0
Query:    2 FNEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQGVDLLG-GPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFC-ADTGMFNLDYLRF 152
            ++E W +PG IEAE YD GGAGV + +TT  +   +      DG   IEA S+   G+++   DAGEW  +T  ++ G Y +++  +AS+  +G  R  +D    G + +  TG W+ ++     D+ + E D  VL   A  G +NL+++ F
Sbjct:  180 YDEQWNLPGKIEAEDYDTGGAGVAYSDTTDQNMGGYR-----DGAVDIEATSDDGGGYNIAWTDAGEWTEYTVGSDAGTY-DIDLRVASNRGEGKIRVSLDGTALGTVDIPQTGGWQNWQTVTVPDIELDETDGSVLRIEAVEGGYNLNWIEF 326          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: UPI0016822ED7 (carbohydrate-binding protein n=1 Tax=Paenibacillus sp. IB182493 TaxID=2772299 RepID=UPI0016822ED7)

HSP 1 Score: 80.1 bits (196), Expect = 1.350e-14
Identity = 50/161 (31.06%), Postives = 81/161 (50.31%), Query Frame = 0
Query:    2 FNEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGV------DVIEAESNPS-HGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQ--GVDL-LGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYLRF 152
            F+ P A+PG IEA +Y+ GG GV +H+            R PD +      D ++  +N + +G +VG   AGEWL +    ++ G + VE + A+   D   R   G D  L GP+++ +TG+W  +        ++PEG+H + F    G F+   L+F
Sbjct:  661 FDLPKAVPGIIEAPFYNTGGEGVGYHD------------RTPDNIGGAYRSDSVDIRTNANFNGLNVGWNQAGEWLKYNVDVKRAGTYRVEITAATTFTDNQARLWLGDDTDLTGPVNIPSTGNWNTWLTTPSPSFYLPEGEHTIRFETVKGEFDFARLKF 809          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: A0A7M2X2X7_9BACT (Carbohydrate-binding protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7M2X2X7_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 1.840e-14
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 0
Query:    5 PWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQGVDLL--GGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADT 142
            PWA+PG I+ E +D GGAG+ + ++   +NV  S      GVD IE   +   G  +G+  AGEWL +T      G +N+    AS    G     VD +  GG L+L +TG W+ ++      + +P G H + F  D+
Sbjct:  514 PWALPGTIQFENFDEGGAGISYQDS-DPTNVGGSYRST--GVD-IEPSGDTDSGFALGHVTAGEWLEYTVNIASAGQYNLGVRFASSNLGGSAHLEVDGVQTGGSLALTSTGGWQTWQTFALNGLTLPAGQHVLRFSLDS 649          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: A0A7V9SIJ1_9BACT (Carbohydrate-binding protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V9SIJ1_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 4.390e-14
Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 0
Query:    3 NEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDG---LGRQGVDLLGGPLSLAATGSWEAFEHPLKEDVWVPEGDH----RVLFCADTGMF-NLDYLR 151
              P  +PG I+AE +D GGA V + +TTS ++   +  R  D VD IE  S+   G++VG   AGEWL +T      G + +EA +A+ G  G   +   GVD+ G P+++  TG W+ +    K  V +  G      ++     TG+  NL+YLR
Sbjct:  107 GSPIGLPGTIQAENFDEGGASVAYVDTTSGNS--GAQYRSTD-VD-IEGTSDTGGGYNVGWMAAGEWLKYTVNVTTAGTYTIEARVAASGNGGTFHVEANGVDITG-PMTVPNTGGWQTWTTVSKTGVALSAGQQVWTVKIDAAGSTGIVGNLNYLR 258          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: Q21GD0_SACD2 (Putative retaining b-glycosidase n=2 Tax=Saccharophagus degradans TaxID=86304 RepID=Q21GD0_SACD2)

HSP 1 Score: 78.6 bits (192), Expect = 4.550e-14
Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 0
Query:    8 IPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNV---EASIASDGYDGLGRQGVDLLGGPLSLA-ATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLD 148
            IPG +EAE+YDLGGAG  + + ++ +N     LR  D VD IEA +N   G+H+G  DAGEWL ++    QG  ++V    AS +S G       G  +   P+ +  ATG W+ F   L   + +  G+  +    D G FN+D
Sbjct:  543 IPGLVEAEHYDLGGAGAAYADVSTGNN--GGVLRADD-VD-IEANAN---GYHIGWLDAGEWLEYSVNVNQGQSFDVLIASASASSGGQFHFEVNGESV--SPILVTPATGGWKTFVSTLHRGLQLNAGEQVLRLVIDGGEFNID 678          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: I0BJY1_9BACL (Glycoside hydrolase n=1 Tax=Paenibacillus mucilaginosus K02 TaxID=997761 RepID=I0BJY1_9BACL)

HSP 1 Score: 77.8 bits (190), Expect = 8.660e-14
Identity = 48/155 (30.97%), Postives = 75/155 (48.39%), Query Frame = 0
Query:    2 FNEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGR----QGVDLLGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYLRF 152
            +N    +PG +EA YY+ GG G+ +HET S  N+    LR     D ++  +N  +GH+VG    GEWL +    ++ G +N E + A+       R     G DL G  + L  +G W  +    KE V++P+G H +      G ++   L F
Sbjct:  681 YNAYKPLPGIVEAPYYNDGGEGIGYHET-SPENIG-GALRG----DAVDVRTNSFNGHNVGWNQTGEWLKYNVEVKEAGLYNFELTTATTMNATQARLWLEDGTDLTG-VMDLPTSGDWNRWVTAKKEGVYLPQGKHTLKLETVHGEYDFARLAF 828          
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Match: A0A5R9G639_9BACL (Carbohydrate-binding protein n=1 Tax=Paenibacillus antri TaxID=2582848 RepID=A0A5R9G639_9BACL)

HSP 1 Score: 76.6 bits (187), Expect = 2.190e-13
Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0
Query:    8 IPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIEAESNPSH-GHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQGVDL---LGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYLRF 152
            +PG +EA +Y+ GG GV +H+TT  +      +      D ++  +N ++ G +VG   AGEWL +    ++ G + VE + A+   D   R  ++    L G + + ATG W A++  L    ++PEG H + F    G ++   L+F
Sbjct:  675 VPGIVEAPFYNTGGEGVGYHDTTPEN------IGGAYRGDSVDIRTNTNYNGLNVGWNRAGEWLKYNVEVKRAGTYRVEVTAATTFADNEARLWLNDTTDLTGAIDIKATGDWNAWKTTLSPSFYLPEGRHTITFETVKGEYDFARLKF 817          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56424.13088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV09_9PHAE4.560e-5451.72GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A537LUF1_9BACT6.820e-1734.67Carbohydrate-binding protein n=2 Tax=Terrabacteria... [more]
UPI0015EF858A1.780e-1636.00glycosyl hydrolase n=1 Tax=Halorhabdus sp. FL145 T... [more]
UPI00178C79D59.950e-1633.33DUF5010 C-terminal domain-containing protein n=1 T... [more]
UPI0016822ED71.350e-1431.06carbohydrate-binding protein n=1 Tax=Paenibacillus... [more]
A0A7M2X2X7_9BACT1.840e-1433.57Carbohydrate-binding protein n=1 Tax=Phycisphaeral... [more]
A0A7V9SIJ1_9BACT4.390e-1434.39Carbohydrate-binding protein n=1 Tax=Acidobacteria... [more]
Q21GD0_SACD24.550e-1436.55Putative retaining b-glycosidase n=2 Tax=Saccharop... [more]
I0BJY1_9BACL8.660e-1430.97Glycoside hydrolase n=1 Tax=Paenibacillus mucilagi... [more]
A0A5R9G639_9BACL2.190e-1329.53Carbohydrate-binding protein n=1 Tax=Paenibacillus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 11..152
e-value: 3.1E-22
score: 81.3
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 6..152
IPR005084Carbohydrate binding module family 6PFAMPF03422CBM_6coord: 45..152
e-value: 2.3E-7
score: 31.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56424contigH-elongata_contig56424:2250..3471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56424.13088.1mRNA_H-elongata_contig56424.13088.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56424 2250..3471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56424.13088.1 ID=prot_H-elongata_contig56424.13088.1|Name=mRNA_H-elongata_contig56424.13088.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MFNEPWAIPGYIEAEYYDLGGAGVDFHETTSSSNVEHSTLRMPDGVDVIE
AESNPSHGHHVGNWDAGEWLAFTSRTEQGGYWNVEASIASDGYDGLGRQG
VDLLGGPLSLAATGSWEAFEHPLKEDVWVPEGDHRVLFCADTGMFNLDYL
RF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf
IPR005084CMB_fam6