prot_H-elongata_contig56344.13082.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56344.13082.1
Unique Nameprot_H-elongata_contig56344.13082.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: F6MHT6_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=F6MHT6_SACJA)

HSP 1 Score: 113 bits (283), Expect = 7.660e-29
Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    2 SDELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTNVE 88
            SDEL F A+ERV+E+LF   S+  +++F  E+ NL+QIHIHSPSEH IGGS  + +IHWVH+K+GTE +L VVGVLFD ++YG+NVE
Sbjct:  101 SDELLFQADERVWEILFGGCSDVPHVEFKGERYNLLQIHIHSPSEHMIGGSEHSAEIHWVHVKEGTEDQLLVVGVLFDTTDYGSNVE 187          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: D8LB10_ECTSI (Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB10_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.180e-18
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 0
Query:    2 SDELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTNVE 88
            S EL F ++  V++V F   ++  YL +  E  NL+Q HIHSPSEH +GG+  A +IH VH+K  T   L VVG++F+VS+YG NVE
Sbjct:  106 STELVFKSDFAVWQVDFSGCTDAPYLQYQGETYNLLQFHIHSPSEHVLGGAEHAAEIHLVHLKQNTTDGLLVVGIMFEVSDYGQNVE 192          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: A0A872YNN4_SACJA (Carbonic anhydrase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A872YNN4_SACJA)

HSP 1 Score: 78.6 bits (192), Expect = 1.760e-15
Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 SDELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKD---GTEAELRVVGVLFDVSEYGTNV 87
            S EL F AN  V+E+ F   +  + L F+  + +L+Q+HIHSPSEH + GSL   +IH VH +D   GTE+EL V+GV  D  E+G NV
Sbjct:  108 SKELDFEANGHVWEIDFSECTSTSNLSFDGGKYSLLQMHIHSPSEHMVAGSLHDAEIHLVHSRDDSDGTESELLVIGVFLDAKEHGWNV 196          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: Q9SMD6_9PHAE (Carbonic anhydrase alpha type (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q9SMD6_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 1.530e-8
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   49 IGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTNVE 88
            IGGS    +IHWVH+K GT+ +L V+GVLFD ++YG+NVE
Sbjct:    2 IGGSEHEAEIHWVHVKAGTDDQLLVIGVLFDTTQYGSNVE 41          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: A0A7S4D4V5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V5_HETAK)

HSP 1 Score: 55.5 bits (132), Expect = 3.860e-7
Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0
Query:    3 DELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTN 86
            D L+ + N   ++V            +ND    L+Q H HSPSE+ IGG     ++H VH     ++ L V+GV+FDV +YG N
Sbjct:   95 DLLYLVDNYHTWKVDMSECDGSYTTTWNDVDYELVQFHFHSPSENTIGGGYFDAEMHLVHAD--ADSNLLVIGVMFDVVDYGGN 176          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: A0A7S3XQ34_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ34_HETAK)

HSP 1 Score: 55.5 bits (132), Expect = 4.840e-7
Identity = 31/82 (37.80%), Postives = 43/82 (52.44%), Query Frame = 0
Query:    5 LFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTN 86
            ++ I N   ++V      +  Y  +      LIQ H HSPSE+ IGG     ++H VH     E EL V+GV+FDV +YG N
Sbjct:  139 VYLIDNYHTWKVDMTSCDDAYYATWKGTDYYLIQFHFHSPSENTIGGGYFDAEMHLVHAS--AEGELLVIGVMFDVVDYGGN 218          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: A0A7W3FQ27_9GAMM (Carbonic anhydrase n=1 Tax=Stenotrophomonas tumulicola TaxID=1685415 RepID=A0A7W3FQ27_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 4.200e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0
Query:   26 YLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGT 85
            Y++   E+ NL+Q H+H+PSEH + G   A ++H VH     + +L VV V FDV E  T
Sbjct:  105 YIELEGERFNLLQFHVHTPSEHRVDGREHAMELHLVHAN--ADGKLAVVAVFFDVGEPNT 162          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: A0A7S3XPW5_HETAK (Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPW5_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 4.270e-6
Identity = 29/84 (34.52%), Postives = 43/84 (51.19%), Query Frame = 0
Query:    3 DELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTN 86
            D L+ + N   ++V            +N     L+Q H HSPSE+ IGG     ++H VH     ++ L V+GV+FDV +YG N
Sbjct:  121 DLLYLVDNYHTWKVDMSECDGSYTTTWNGVDYELVQFHFHSPSENTIGGGYFDAEMHLVHAD--ADSNLLVIGVMFDVVDYGGN 202          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: H6WB77_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB77_VAULI)

HSP 1 Score: 51.6 bits (122), Expect = 1.100e-5
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 0
Query:    1 MSDELFFIANERVFEVLFDRYSEQA-YLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTNV 87
            M D+L + A+ + + V FD Y +    +  N    NL+Q H+HS SEH IGG     +IH+VH        L VVGV+  +S    NV
Sbjct:   45 MLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVM--ISSTSDNV 130          
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Match: H6WB76_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB76_VAULI)

HSP 1 Score: 51.2 bits (121), Expect = 1.750e-5
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0
Query:    1 MSDELFFIANERVFEVLFDRYSEQA-YLDFNDEQCNLIQIHIHSPSEHAIGGSLRAGKIHWVHIKDGTEAELRVVGVL 77
            M D+L + A+ + + V FD Y +    +  N    NL+Q H+HS SEH IGG     +IH+VH        L VVGV+
Sbjct:  121 MLDDLDYKADGKGWTVTFDGYCQTTPTITINGAVFNLLQFHLHSVSEHVIGGGYYDAEIHFVHYSALDPTSLAVVGVM 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56344.13082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
F6MHT6_SACJA7.660e-2960.92Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
D8LB10_ECTSI6.180e-1848.28Carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A872YNN4_SACJA1.760e-1547.19Carbonic anhydrase n=1 Tax=Saccharina japonica Tax... [more]
Q9SMD6_9PHAE1.530e-860.00Carbonic anhydrase alpha type (Fragment) n=1 Tax=L... [more]
A0A7S4D4V5_HETAK3.860e-735.71Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
A0A7S3XQ34_HETAK4.840e-737.80Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
A0A7W3FQ27_9GAMM4.200e-641.67Carbonic anhydrase n=1 Tax=Stenotrophomonas tumuli... [more]
A0A7S3XPW5_HETAK4.270e-634.52Carbonic anhydrase (Fragment) n=1 Tax=Heterosigma ... [more]
H6WB77_VAULI1.100e-537.50Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]
H6WB76_VAULI1.750e-538.46Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036398Alpha carbonic anhydrase domain superfamilyGENE3D3.10.200.10coord: 1..88
e-value: 2.0E-11
score: 46.1
IPR036398Alpha carbonic anhydrase domain superfamilySUPERFAMILY51069Carbonic anhydrasecoord: 23..85
IPR001148Alpha carbonic anhydrase domainPROSITEPS51144ALPHA_CA_2coord: 1..88
score: 9.747

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56344contigH-elongata_contig56344:1823..2887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56344.13082.1mRNA_H-elongata_contig56344.13082.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56344 1823..3573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56344.13082.1 ID=prot_H-elongata_contig56344.13082.1|Name=mRNA_H-elongata_contig56344.13082.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
MSDELFFIANERVFEVLFDRYSEQAYLDFNDEQCNLIQIHIHSPSEHAIG
GSLRAGKIHWVHIKDGTEAELRVVGVLFDVSEYGTNVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036398CA_dom_sf
IPR001148CA_dom