prot_H-elongata_contig5634.13079.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5634.13079.1
Unique Nameprot_H-elongata_contig5634.13079.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length330
Homology
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: A0A1S2Z2D8_CICAR (uncharacterized protein LOC101508631 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Z2D8_CICAR)

HSP 1 Score: 87.0 bits (214), Expect = 3.530e-15
Identity = 92/346 (26.59%), Postives = 154/346 (44.51%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNL-PWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDEDVKERLGPVNILV-----AKRRKYSHTPYLSVAWALG-----PECHQEKIHGV--------DNGQVQKDILLVFKRLLFHRTANTASEESRKESVSMALAQLAMYKRGTWDGYIYLEYANKMGMAEWWEMYGSMCAEDMAQVATRVGFKIPSSAATERKWSLH 329
            CV H ++L+ K  + L  W   T  + K +V+YI NH +  A+ +ANS  + L VA +TRFA++++  KR L  R  L        + +++K      R +G  V   +  G ++   FW E+E +V I +P+YLL++ ADG    + + +     +  ++ +I K         E     +  V  R   +N  +         ++  T YLS     G     P   +E +  V        +N + QK  LL  +  +FH+         +K   +M+ AQL +                 M   +WW MYGS  +E +A+VA +V  +  SS++ ER WS +
Sbjct:  236 CVVHTLNLIFKDFAELFEWLRNTYKQGKTIVKYIINHSQVLAMYRANSKLELLKVA-KTRFASHYILLKRLLMCREALATTVVLNSWKEWIKQGDENTRKIGALVAETI--GSDF---FWEEVEHVVKITKPIYLLIKFADGEGPKMGEFYEKIDSMLGEIQEIMKTNKYANCYSEM----ETIVTARWTKMNYTIHCLGFVLNPRFYDTHYLSTPAPGGIARKDPNQDKEVVTVVMQAFEKIFENAEEQK--LLRDQFAIFHK--------KKKGIYAMSAAQLDVVT---------------MDSIDWWSMYGSETSE-LAEVAKKVLSQPISSSSAERTWSTY 545          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI000B781A96 (uncharacterized protein LOC110642122 n=4 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B781A96)

HSP 1 Score: 82.4 bits (202), Expect = 1.250e-13
Identity = 90/347 (25.94%), Postives = 150/347 (43.23%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDED--VKERLGPVNI------LVAKRRKYSH----TPYLSVAWALGPECHQEKIHGV--------DNGQVQKDILLVFKRLLFHRTANTASEESRKESVSMALAQLAMYKRGTWDGYIYLEYANKMGMAEWWEMYGSMCAEDMAQVATRVGFKIPSSAATERKWSLH 329
            C A G ++         W + T  + K +V+Y  NH +  ++ +  S  + L VA +TRFA++++  KR L  R  L        + ++ K+   K++  G  V   + + E     FW E+E +V+I +P+YLL++ +DG      KL  ++ ++   L ++   K  +T  + +  +   +  V ER   +NI           R Y H    TP         P   +E + GV        +NG  QK  LL  + ++FH          +K   SM  AQ+                A  M   +WW  YGS   E +A+VA +V  +  SS++ ER WS +
Sbjct:  308 CKAAGKEIEKDFAQKFDWLNDTYKRGKCIVKYFINHTQALSIFRTQSKLELLKVA-KTRFASHYILLKRLLVCREALATTIVLKSWKEWTKNGDEKMKTTGALVAETISDDE-----FWEEVENIVAITKPLYLLIKFSDGEG---PKLGEIYEKMDSMLGEL---KDIMTNNKYKDSYEQMEAIVVERWAKMNIPMHCLGFALTPRFYDHHYLETPAPGGVPRKAPNLDKEVVLGVMDDFERIAENGAKQK--LLREQFVIFHM---------KKGIYSMPAAQID---------------AVTMDSIDWWSTYGSETPE-LAEVAKKVLSQPISSSSAERNWSTY 615          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI001C690C13 (uncharacterized protein LOC111920429 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI001C690C13)

HSP 1 Score: 70.5 bits (171), Expect = 9.930e-10
Identity = 42/142 (29.58%), Postives = 77/142 (54.23%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISN-LPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADG 143
            C  H ++L+ K ++    W  +T  + K +V+Y  NH    +  + NS  + L VA +TRFA++++   R +E R  L        + ++VK+     R+VG K+   +K+      QFW ++E +++I +P++LLL+  DG
Sbjct:  329 CCVHTLNLIFKDLAKEFYWLEETYKRGKGIVKYFINHTHALSFFRENSTLELLKVA-KTRFASHYIVLHRLIECREALSTTIVLNSWREWVKNGDEATRIVGSKIVDTVKD-----DQFWDDVENILAITKPIFLLLKFCDG 464          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI000B780185 (uncharacterized protein LOC110665762 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B780185)

HSP 1 Score: 65.5 bits (158), Expect = 3.360e-8
Identity = 41/141 (29.08%), Postives = 73/141 (51.77%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADG 143
            C A G ++         W + T  + K +V+Y+ NH +  ++ +  S K  LL   +TRFA++++  KR L  R  L        + ++ K+   K+R +G  V   + + E     FW E+E +V+I +P+YLL++ +DG
Sbjct:  184 CKAAGKEIEKDFAQKFDWLNDTYKRGKCIVKYVINHTQALSIFRTQS-KLELLKVTKTRFASHYILLKRLLVCREALATTIVLKSWKEWTKNGDEKMRTMGALVAETISDDE-----FWEEVENIVAITKPLYLLIKFSDG 318          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: A0A388LE59_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LE59_CHABU)

HSP 1 Score: 64.7 bits (156), Expect = 9.080e-8
Identity = 48/152 (31.58%), Postives = 83/152 (54.61%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRAL--RKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLF 152
            C AH ++LLLK ISN+ W      K +N+V++I NH+ T  L  R +   +K L++  E RFA+ +L   R  + R +L+ + ++   D Y  S   K R   + +   ++    WQ     +++ ++SI++P+Y LLR+ D   L  S+L+
Sbjct:  389 CAAHTLNLLLKDISNIAWIKTVWKKGRNLVKFIKNHQSTMGLMSRCSMGDRKVLVMPTEVRFASVYLMLIRIWDRRHVLKHMMDNGWLDIYWSSQ--KDREDAEDIFAHVRCDMWWQ-----KVDTILSIIKPIYDLLRMMDSDGLAHSQLW 533          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI0008FF7D69 (uncharacterized protein LOC100853850 n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FF7D69)

HSP 1 Score: 61.6 bits (148), Expect = 7.590e-7
Identity = 77/332 (23.19%), Postives = 142/332 (42.77%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKC---LLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADG-VKLCVSKLFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDEDVKERLGPVNILVAKRRKYSHTPYLSVAWALGPECHQEKIHGVDNGQVQKDILLVFKRLLFHRTANTASEESRKESVSMALAQLAMY---KRGTWDGYIYLEYANKMGMAEWWEMYGSMCAEDMAQVATRVGFKIPSSAATERKWS 327
            C AH +DL+ + I   P   +     + +  +I NH        A   K C   ++    TRFATN+++    L+ R  L+ +   ++ D++ +    + +L G+++  +L     +   +W  L  +VS+ EP+Y++LR+ D  V   +  ++ L   + E L +           +    W  + +++R           +K    P  + A+ L P     +  G D   +Q  +  VF +L           +   ES+     +L ++   KRG  D    +   + M  AEWW MYG+     + ++A +V  +  SS+A ER WS
Sbjct:  205 CAAHCIDLIFEDIGKKPNVIEVINNARKITNFIYNH----GWLLAQMRKYCGGDIVRPGATRFATNYIALDSLLKKRADLKKL---FMSDEWAQHKLSRTKL-GRELEQLL-----FDHTYWDRLTNIVSLYEPLYVVLRLVDSEVVPTMPFVYELMHVMKENLIR-----------QGAGDWMFKIIQDRW----------QKTLKHPLHAAAYFLNPRFQYRRGVGSDPELLQA-VHDVFAKL-----------DPTTESLGQFGNELVLFRDAKRGFGDRAA-IASRSTMVPAEWWFMYGNQ-TPTLRKLAIKVLSQTASSSACERNWS 488          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: A0A388MCJ1_CHABU (DUF659 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MCJ1_CHABU)

HSP 1 Score: 61.2 bits (147), Expect = 1.260e-6
Identity = 45/153 (29.41%), Postives = 81/153 (52.94%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRAL--RKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLFH 153
            C AH + LLLK ISN+ W      K +N+V++I NH+ T  L  R +   +K L++  E RF + +    R  + R +L+ + ++   D Y  S   K R   + +   ++    WQ     +++ ++SI++P+Y LLR+ D   + +S+L+ 
Sbjct:  158 CAAHTLSLLLKDISNIAWIKTVWKKGRNLVKFIKNHQSTMGLLSRCSMGDRKVLVMPTEVRFTSVYQMLIRIWDRRHVLKHMMDNGWLDIYWSSW--KDREDAEDIFAHVRCDIRWQ-----KVDTILSIMKPIYDLLRMMDSDGVALSQLWR 303          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI0008FFA3C2 (uncharacterized protein LOC104878865 n=2 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FFA3C2)

HSP 1 Score: 60.8 bits (146), Expect = 1.390e-6
Identity = 75/332 (22.59%), Postives = 143/332 (43.07%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKC---LLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADG-VKLCVSKLFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDEDVKERLGPVNILVAKRRKYSHTPYLSVAWALGPECHQEKIHGVDNGQVQKDILLVFKRLLFHRTANTASEESRKESVSMALAQLAMY---KRGTWDGYIYLEYANKMGMAEWWEMYGSMCAEDMAQVATRVGFKIPSSAATERKWS 327
            C AH +DL+ + I   P   +     + +  +I NH        A   K C   ++    TRFATN+++    L+ R  L+ +   ++ D++ +    + +L G+++  +L     +   +W  L  +VS+ EP+Y++LR+ D  +   +  ++ L + + E L +           +    W  + +++R           +K    P  + A+ L P     +  G D   +Q  +  VF +L           +   +S+     +L ++   KRG  D    +   + M  AEWW MYG+     + ++A +V  +  SS+A ER WS
Sbjct:  146 CAAHCIDLIFEDIGKRPNVIEVINNARKITNFIYNH----GWLLAQMRKYCGGDIVRPGATRFATNYIALDSLLKKRADLKKL---FISDEWAQHKLSRTKL-GRELEQLL-----FDHTYWDRLTNIVSLYEPLYVVLRLVDSEIVPTMPFVYELMQVMKENLIR-----------QGAGDWMFKIIQDRW----------QKTLKHPLHAAAYFLNPRFQYRRGVGSDPELLQA-VHDVFAKL-----------DPTTKSLGQFGNELVLFRDAKRGFGDRAA-IASRSTMVPAEWWFMYGNQ-TPTLRKLAIKVLSQTASSSACERNWS 429          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: A0A565C9A9_9BRAS (DUF659 domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565C9A9_9BRAS)

HSP 1 Score: 59.3 bits (142), Expect = 2.400e-6
Identity = 41/156 (26.28%), Postives = 73/156 (46.79%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLFHLFRQL 158
            C AH +DL+L+G+S LPW ++   + K++  +I  H KT  + +     K ++    TRFAT FL+ +   + +  L+ +     + +   S   K +     V             FW     ++ +  P+  +LR+ADG K   S  F+L+R +
Sbjct:  160 CAAHTLDLMLEGVSKLPWFAKVINQAKSLTIFIYAHHKTLFMMRKYKNNKDIVRPGATRFATCFLTLQSLYDKKAQLKSMFGSDEWHECKHSKCVKGKTASDTVM---------SYAFWNNALVVLKVFTPLVKVLRLADGEKKTFSG-FYLWRDI 305          
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Match: UPI001D01D849 (uncharacterized protein LOC123110480 isoform X1 n=3 Tax=Triticum TaxID=4564 RepID=UPI001D01D849)

HSP 1 Score: 60.1 bits (144), Expect = 2.930e-6
Identity = 80/330 (24.24%), Postives = 127/330 (38.48%), Query Frame = 0
Query:    3 CVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSPKKCLLVANETRFATNFLSAKRTLEMRPMLE--VVSNDYVYDDYVKSATPKVRLVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSKLFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDEDVKERLGPVNILVAKRRKYSHTPYLSVAWA-LGPECHQEKIHGVDNGQVQKDILLVFKRLLFHRTANTASEESRKESVSMALAQLAMYK--RGTWDGYIYLEYANKMGMAEWWEMYGSMCAEDMAQVATRVGFKIPSSAATERKWS 327
            C AH V+L+LK I   P         K + ++  NH       + N   + L+  N TRF T F+  +  LE +      +VS+D+    +   A             +  E       +W  LE+++ +LEP+Y+ LR AD  K C    F         +T I K  + L G  +            L  V   V+ R +      L VA A L P  H          +V    L  +   L       A  ES      +A+ +++ Y+  RG +   +    A +M   EWW  +G     ++ + A R+  +  SS+  ER W+
Sbjct:  444 CAAHTVNLMLKDIGKFPEVDVIVKSAKQICRFFYNHNNLHDSMRKNVGGE-LIKPNATRFGTVFMFLESYLEKKDKFRKWMVSDDWKNSIWKNDADH-----------VFAEDLLSSNMWWTALEWVLDLLEPLYVALRYADTQKKCTLSGFK-----KTMMTAIQKMSSHLGGGSQM-----------LDRVMSKVSPRMEDMQNETLMVAAAVLDPFTHY---------RVNLSNLPEYASALTDAIEKIADPES----ALLAINEISTYRECRGRFRHSLARSSAERMAPTEWWFQFGGE-VPNLQKWALRIVSQCVSSSGCERNWT 731          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5634.13079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A1S2Z2D8_CICAR3.530e-1526.59uncharacterized protein LOC101508631 n=1 Tax=Cicer... [more]
UPI000B781A961.250e-1325.94uncharacterized protein LOC110642122 n=4 Tax=Hevea... [more]
UPI001C690C139.930e-1029.58uncharacterized protein LOC111920429 n=1 Tax=Lactu... [more]
UPI000B7801853.360e-829.08uncharacterized protein LOC110665762 n=1 Tax=Hevea... [more]
A0A388LE59_CHABU9.080e-831.58Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
UPI0008FF7D697.590e-723.19uncharacterized protein LOC100853850 n=1 Tax=Vitis... [more]
A0A388MCJ1_CHABU1.260e-629.41DUF659 domain-containing protein n=1 Tax=Chara bra... [more]
UPI0008FFA3C21.390e-622.59uncharacterized protein LOC104878865 n=2 Tax=Vitis... [more]
A0A565C9A9_9BRAS2.400e-626.28DUF659 domain-containing protein n=1 Tax=Arabis ne... [more]
UPI001D01D8492.930e-624.24uncharacterized protein LOC123110480 isoform X1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32166FAMILY NOT NAMEDcoord: 2..143
NoneNo IPR availablePANTHERPTHR32166:SF55coord: 2..143
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5634contigH-elongata_contig5634:1054..2043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5634.13079.1mRNA_H-elongata_contig5634.13079.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5634 1054..2329 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5634.13079.1 ID=prot_H-elongata_contig5634.13079.1|Name=mRNA_H-elongata_contig5634.13079.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=330bp
MKCVAHGVDLLLKGISNLPWASQTTTKNKNVVQYICNHKKTRALRKANSP
KKCLLVANETRFATNFLSAKRTLEMRPMLEVVSNDYVYDDYVKSATPKVR
LVGQKVRVMLKEGEEWQGQFWFELEFLVSILEPMYLLLRIADGVKLCVSK
LFHLFRQLPEKLTKICKQKAALTGEEEQSGWRDEDVKERLGPVNILVAKR
RKYSHTPYLSVAWALGPECHQEKIHGVDNGQVQKDILLVFKRLLFHRTAN
TASEESRKESVSMALAQLAMYKRGTWDGYIYLEYANKMGMAEWWEMYGSM
CAEDMAQVATRVGFKIPSSAATERKWSLHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf