prot_H-elongata_contig56310.13076.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56310.13076.1
Unique Nameprot_H-elongata_contig56310.13076.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length213
Homology
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BLAST of mRNA_H-elongata_contig56310.13076.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 4.140e-43
Identity = 102/218 (46.79%), Postives = 127/218 (58.26%), Query Frame = 0 
Query:    1 MRTALLPALQTLRVLYDELRGHEEALGRNPDDPDSSLRRVPDPVGALLYASEPEGRAAREYQQLG---GALPCYRVAAADGDCMKVFDVPGGNVVGVALDPVSGISG---EHMGASAATEVVAAAQRAKESMVLLDSVRPSAWVDGDVATVVRIAASACAGSGKALVISVRSVGQLHDAAMAALAASQTQILGQAIDCDIVLLIEPAAALWEAGLLYL 212
            MRTA+LPA QTL+ LY ELR  EEALGR+P+D D +L RVP+PVGALLYA+EPE RAA E   LG    ALPC+R+   DG  + V DV  G+VVGV +DPV   +                         +V L  VRPS W  GD+ TV+RIA+SACAG+GK LV++   +G      +    A++           + LLIEP   LWEAGLLYL
Sbjct:  111 MRTAVLPAAQTLKTLYGELRQREEALGRSPEDTDWTLSRVPNPVGALLYAAEPEERAAEEMVALGETAAALPCFRLGGTDGTAV-VVDVSSGHVVGVRVDPVGDNAAGXXXXXXXXXXXXXXXXXXXXXXGLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTTTVLG------VGGTGAAEDGTTPP----PMALLIEPMPELWEAGLLYL 317
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56310.13076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI4.140e-4346.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56310contigH-elongata_contig56310:2441..3079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56310.13076.1mRNA_H-elongata_contig56310.13076.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56310 2233..3707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56310.13076.1 ID=prot_H-elongata_contig56310.13076.1|Name=mRNA_H-elongata_contig56310.13076.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp
MRTALLPALQTLRVLYDELRGHEEALGRNPDDPDSSLRRVPDPVGALLYA
SEPEGRAAREYQQLGGALPCYRVAAADGDCMKVFDVPGGNVVGVALDPVS
GISGEHMGASAATEVVAAAQRAKESMVLLDSVRPSAWVDGDVATVVRIAA
SACAGSGKALVISVRSVGQLHDAAMAALAASQTQILGQAIDCDIVLLIEP
AAALWEAGLLYL*
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