prot_H-elongata_contig56280.13074.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56280.13074.1
Unique Nameprot_H-elongata_contig56280.13074.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length231
Homology
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 9.030e-116
Identity = 170/225 (75.56%), Postives = 198/225 (88.00%), Query Frame = 0
Query:    1 NPVQKLQELLTRAKEKGMSAERLFQHFAPKGETSVTPEMFETGLRTLGQRAFDIDEAELEHLVCTLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARRLSNTESKDDLNVAARKIARRRSSLRAVPIGSLLHQGSQFFWRSKETIDVAFHYNSDEGFITISTQCPARGYNYPAIFVDASKIPISKVDAVERANSNGRLESLAGRERQDEVDKAVAALRVEYLQHR 225
            +PV+KLQ LLT+AKE+GMSAERLF+HFAP GE SVTP MFE+ LR LGQRAFD+DE ELEHLV   D++G+GT+ELD+FMTFCLSIPSLPWRAEKARRL+N ESKD+LNVAARKIARRRSSLRAVPIG L+HQGS+FFWRSKETIDVA H N+DEG +TIST+CP RGYNYPAIFVD SKIP+ K +AV RAN+ G+ ES++  ER++  DKA+ ALRVEYLQHR
Sbjct:  109 SPVEKLQVLLTKAKERGMSAERLFEHFAPGGEASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNAESKDELNVAARKIARRRSSLRAVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAVGQFESMSKDERREATDKAMTALRVEYLQHR 333          
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.100e-50
Identity = 90/184 (48.91%), Postives = 125/184 (67.93%), Query Frame = 0
Query:    2 PVQKLQELLTRAKEKGMSAERLFQHFAPKGETSVTPEMFETGLRTLGQRAFDIDEAELEHLVCTLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARRLSNTESKDDLNVAARKIARRRSSLRAVPIGSLLHQGSQFFWRSKETIDVAFHYNSDEGFITISTQCPARGYNYPAIFVDASKIPISK 185
            P++KLQ LLT AKE+GMSAERLF+ FAP G  ++T + FE  LR L  + F +  AEL+ L+   D+N +G IEL +FM FC++IPSL W+AE+ARR+S  +  + L  AAR   RRRS+ +AV +G  +H    FFWRS++ +DV  H N  EG + IST+   R   +P IFV+AS+IPI++
Sbjct:   30 PLEKLQALLTAAKERGMSAERLFEFFAPAGSATMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARRMSAVDGPEALTEAARNSERRRSTCKAVDLGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIAR 213          
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.500e-16
Identity = 69/221 (31.22%), Postives = 105/221 (47.51%), Query Frame = 0
Query:   35 VTPEMFETGLRTLGQRAFDIDEAELEHLVCTLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARR--LSNTESKD---DLNVAARKIARRRSSLR----------------AVPIGSLLHQGSQFFWRSKETIDVAFHYNSDEGFITISTQCPARGYNYPAIFVD--ASKIPISKVDAVERANSNG-----RLESLAGRERQDEV--DKAVAALRVEYLQHR 225
            +T   F+ GL TLG   F+I   E   +   LD+NG G+I+L +F  FCL IPS+ W+AE+ARR  L N   +D   +L  AAR +A    S                   V +G + ++G +FFWR+K+ I+V    N  +GF+ I    PA       I  D  A ++      A+  + S G       E    ++++D+   +KA  A   +Y+ HR
Sbjct:  297 ITSASFQHGLATLG---FNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARRGILGNNAGEDGDRELEKAARDMANETVSANDAAEGGLGGELAKLEPLVHLGKIFYRGEKFFWRTKDLIEVVVQLNEAKGFLAI----PASAAAEAEILNDLKAKRLAAKTEHAMGGSGSRGGESDANKEQAGDQQQEDQALSEKAHMAYIADYIVHR 510          
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.540e-15
Identity = 56/180 (31.11%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   65 TLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARRLSNTES------KDDLNVAARKIARRRSSLRA----------VPIGSLLHQGSQFFWRSKETIDVAFHYNSDEGFITISTQCPARGYNYPAIFVDASKIPISKVDAV-ERANS-----NGRLESLAGRERQDEVDKAVAALRVEYL 222
            T D++GSGTIEL +F+ +CL I ++ W+AE+ RR +  ++      + D  +   + A R +   A           P+G+L+++GS+ FWR+ E++ +A H N ++  I IST        +P + VD+  I ++  DAV ER         G ++ L    R    DKA A++  +YL
Sbjct:  136 TFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYL 315          
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN)

HSP 1 Score: 69.7 bits (169), Expect = 3.110e-10
Identity = 33/92 (35.87%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   10 LTRAKEKGMSAERLFQHFAPKG---ETSVTPEMFETGLRTLGQRAFDIDEAELEHLVCTLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARR 98
            ++ AKEKG+  +++F++F  +G   +  +TP+ FE  ++ LG   + I   EL  L+   D + +GT+ +++F+ +CL IP+L W+AEK RR
Sbjct:    1 MSNAKEKGLRVDQIFKYFKSEGAGDDDDITPDDFEAAMKKLG---WSISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLRR 89          
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Match: A0A7S2D074_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D074_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.630e-8
Identity = 62/225 (27.56%), Postives = 105/225 (46.67%), Query Frame = 0
Query:    1 NPVQKLQELLTRAKEKGMSAERLFQHFAPK-GETSVTPEMFETGLRTL--GQRAFDIDEAELEHLVCT--LDSNGSGTIELDDFMTFCLSIPSLPWRAEKARRLSN--------------TESKDDLNVAARKIARRRSSLRAVPIGSLLHQGSQFFWRSKETIDVAFHYNSDEGFITISTQCPARGYNYPAIFVDASKIPI----SKVD--AVERANSNGRLES 200
            +PV+KL  ++++AKE G S E +F  F  + GE +   E FE GL+ L  GQ A   D A  E  V    LD N S  ++L +F  + L + ++ W+AE+ R+ ++              T S D++      + +  +      I  + H G +FFWRS+  +++ F        I ++        N   IF+ + +I +    S+ D  +V  +  N +LES
Sbjct:   93 SPVEKLDLIMSKAKESGKSYEAIFNEFRHENGEINF--EDFEIGLKKLIKGQTADPDDTATKEFRVMFDYLDDNQSNGVDLKEFQEYALKMKNVSWKAERIRQSNDFPGSLLNKAVVNPATFSNDEIKTKTCVVDKHHTDT----ITEVYH-GPKFFWRSQTKLELVFTQYEITNCIVVTAFHEKLQVNLDPIFLKSDQIMLVAARSEADHESVSTSKKNSKLES 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56280.13074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSJ9_ECTSI9.030e-11675.56EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA1.100e-5048.91EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D7G5R3_ECTSI3.500e-1631.22EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LCP2_ECTSI1.540e-1531.11EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
F0XWQ4_AURAN3.110e-1035.87EF-hand domain-containing protein n=1 Tax=Aureococ... [more]
A0A7S2D074_9STRA5.630e-827.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availableGENE3D1.10.238.10coord: 3..159
e-value: 1.5E-10
score: 43.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 67..79
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 54..89
score: 9.883
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 15..50
score: 5.475
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 21..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56280contigH-elongata_contig56280:8..2957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56280.13074.1mRNA_H-elongata_contig56280.13074.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56280 8..2957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56280.13074.1 ID=prot_H-elongata_contig56280.13074.1|Name=mRNA_H-elongata_contig56280.13074.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=231bp
NPVQKLQELLTRAKEKGMSAERLFQHFAPKGETSVTPEMFETGLRTLGQR
AFDIDEAELEHLVCTLDSNGSGTIELDDFMTFCLSIPSLPWRAEKARRLS
NTESKDDLNVAARKIARRRSSLRAVPIGSLLHQGSQFFWRSKETIDVAFH
YNSDEGFITISTQCPARGYNYPAIFVDASKIPISKVDAVERANSNGRLES
LAGRERQDEVDKAVAALRVEYLQHRHERGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair