prot_H-elongata_contig56271.13073.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56271.13073.1
Unique Nameprot_H-elongata_contig56271.13073.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length109
Homology
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 4.610e-49
Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            +VL+PHFTG++IDNV+E G   +FRR TVYLVLA++ CAIF+GIRG IF+VVG  VNVR+R++LFESLV QEIGFFDTTKTGDL+SRL++DCTKVGDQVTLNVNVFLR
Sbjct:  103 KVLVPHFTGNMIDNVVEGGGDSEFRRSTVYLVLAAVSCAIFSGIRGCIFSVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKVGDQVTLNVNVFLR 210          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.440e-40
Identity = 74/108 (68.52%), Postives = 89/108 (82.41%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QVLIPH+TG ++  V++ G   DFR   V LV A+IVCAIFTG+RG +FT+VG  VNVRIRQ LF+SLV QEIGFFDTTKTG+++SRLS DCTKVGDQV LN+N+FLR
Sbjct:   97 QVLIPHYTGTMVAAVVDRGREADFRPAAVRLVGAAIVCAIFTGVRGGLFTLVGSRVNVRIRQMLFDSLVRQEIGFFDTTKTGEITSRLSADCTKVGDQVCLNINLFLR 204          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.610e-36
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QVLIPH+TG  ID ++    +  F+   V LVL + VC   TG+RGAIFT+VG  VN RIR  LF+SL+ QE+GFFDT KTGDLSSRLS+DCTKVGDQV+LN+N FLR
Sbjct:  373 QVLIPHYTGKAIDAIVSEEGAAAFQHAMVMLVLCAAVCGACTGLRGAIFTIVGARVNRRIRDMLFQSLIRQEVGFFDTAKTGDLSSRLSSDCTKVGDQVSLNINFFLR 480          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A4D9CQD5_9STRA (Uridine kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQD5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 8.760e-36
Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QVLIPH+TG  ID ++    +  F+   V LVL + VC   TG+RG IFT+VG  VN RIR  LF+SL+ QE+GFFDT KTGDLSSRLS+DCTKVGDQV+LN+N FLR
Sbjct:  689 QVLIPHYTGKAIDAIVSEEGAAAFQHAMVMLVLCAAVCGACTGLRGGIFTIVGARVNRRIRDMLFQSLIRQEVGFFDTAKTGDLSSRLSSDCTKVGDQVSLNINFFLR 796          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A7S0T2T4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T2T4_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 3.680e-30
Identity = 52/105 (49.52%), Postives = 80/105 (76.19%), Query Frame = 0
Query:    4 IPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            +PHFTG+++D V    D   FRR +V L++A++   IF G+RG+IFTV    +N R+R++LF++++SQ++GFFD  KTGDLSSRL+NDC+ V + ++LN+N+ LR
Sbjct:   51 VPHFTGNLVDAVAIDRDPDAFRRYSVMLLIAALASGIFAGLRGSIFTVQMARLNARVRRRLFDTILSQDVGFFDLNKTGDLSSRLNNDCSTVSNALSLNINILLR 155          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A7S2SER0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SER0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.070e-30
Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDS-------VDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QV IP FTG I+D++ +S           +F+     L   SI   IF GIRG+IF++VGG  N R+R  + +S++ Q++GFFDTTKTGD++SRLS+D T VGDQVTLN+NVFLR
Sbjct:   85 QVFIPRFTGHILDSIAKSSSQHVDLSQLPEFKSNMQNLFFVSIFAGIFAGIRGSIFSIVGGRFNARMRIMIMDSIMCQDMGFFDTTKTGDITSRLSSDTTLVGDQVTLNINVFLR 199          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A7S3LJM9_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LJM9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.060e-29
Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNV-----------IESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QV IP F G+I+D++           I   D   F      LV+AS++  +F+G+RG+IFTVVGG VNVR+R +L ++L++Q+IGFFD TKTGD++SRLS+D T VGDQVTLNVNVFLR
Sbjct:  299 QVFIPRFLGNILDSLAHEFRDGGNRDINMWDVPGFMVNVRLLVIASVLAGVFSGLRGSIFTVVGGRVNVRLRVQLMDALLAQDIGFFDVTKTGDITSRLSSDTTLVGDQVTLNVNVFLR 417          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A8J5XIU8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIU8_DIALT)

HSP 1 Score: 120 bits (302), Expect = 1.440e-29
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            + LIP+  G+I++ +  S D   FRRP + LVL + V  + TG+RGA FTV+G   + R+RQ+L ++L+  E+GFFD TKTG++SSRLS DC KVGDQV LNVNVF+R
Sbjct:  228 ESLIPYLYGEILNEIALSADPAAFRRPMLQLVLTAAVTGLATGVRGATFTVLGARFSTRLRQRLLDALLRAELGFFDVTKTGEISSRLSADCQKVGDQVELNVNVFVR 335          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A6S8Y5W8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8Y5W8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.960e-29
Identity = 66/124 (53.23%), Postives = 87/124 (70.16%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIE----------SGDSVDFRRPTVYL------VLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            QVLIP +TG+++D + +           GD  D  +   +L      +LASI+  +F+G RG+IF+VVGG VNVR+R  L +SL++Q+IGFFD TKTGD+SSRLS+D T VGDQVTLNVNVFLR
Sbjct:  183 QVLIPRYTGNMLDAIAQYAIRQIDGNGGGDGKDIWKVPGFLSNMKRLILASILGGVFSGCRGSIFSVVGGRVNVRLRSLLMDSLLAQDIGFFDITKTGDISSRLSSDTTLVGDQVTLNVNVFLR 306          
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Match: A0A7S2PB77_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB77_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.640e-28
Identity = 62/127 (48.82%), Postives = 85/127 (66.93%), Query Frame = 0
Query:    1 QVLIPHFTGDIIDNVIESGDSVDFRRPTVY-------------------LVLASIVCAIFTGIRGAIFTVVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVTLNVNVFLR 108
            Q +IP   G+++D + +   S +    TV                    LV+A+++CA+F+G+RG IFT++GG VN R+R KL +SL++QEIGFFDTTKTGD++SRL +D T VGDQVTLNVNVFLR
Sbjct:  387 QTVIPRLIGNVLDALADYEHSENGHTTTVLMEDKSDIWNVPGFRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLR 513          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56271.13073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI4.610e-4975.93ABC transmembrane type-1 domain-containing protein... [more]
A0A835YSY9_9STRA1.440e-4068.52ABC transporter type 1, transmembrane domain-conta... [more]
W7TKE5_9STRA2.610e-3662.96Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A4D9CQD5_9STRA8.760e-3662.04Uridine kinase n=1 Tax=Nannochloropsis salina CCMP... [more]
A0A7S0T2T4_9CHLO3.680e-3049.52Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A7S2SER0_9STRA5.070e-3051.30Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S3LJM9_9STRA1.060e-2953.78Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A8J5XIU8_DIALT1.440e-2953.70Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A6S8Y5W8_9STRA1.960e-2953.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2PB77_9STRA1.640e-2848.82Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..108
e-value: 1.4E-26
score: 95.5
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 2..107
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 2..107
e-value: 1.9E-22
score: 80.2
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..107
score: 20.566
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 2..108
IPR030254ATP-binding cassette subfamily B member 9PANTHERPTHR24221:SF242ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 9coord: 2..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..108
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56271contigH-elongata_contig56271:331..1071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56271.13073.1mRNA_H-elongata_contig56271.13073.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56271 331..1071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56271.13073.1 ID=prot_H-elongata_contig56271.13073.1|Name=mRNA_H-elongata_contig56271.13073.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp
QVLIPHFTGDIIDNVIESGDSVDFRRPTVYLVLASIVCAIFTGIRGAIFT
VVGGSVNVRIRQKLFESLVSQEIGFFDTTKTGDLSSRLSNDCTKVGDQVT
LNVNVFLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom
IPR039421Type_I_exporter
IPR030254ABCB9