prot_H-elongata_contig56229.13067.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56229.13067.1
Unique Nameprot_H-elongata_contig56229.13067.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
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BLAST of mRNA_H-elongata_contig56229.13067.1 vs. uniprot
Match: D7FU11_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU11_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.480e-15
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0 
Query:    1 ALVAGTTPKTLLARLCLGVVRLLDDSVSAMRRGGGSSQYEKLDAPFLVHITF 52
            ALVAG TPKTLLARLC GV   L+++VSAMR+GG SS Y KLD+PFLVHI+F
Sbjct:  220 ALVAGKTPKTLLARLCEGVRGQLEEAVSAMRKGGSSSAYHKLDSPFLVHISF 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56229.13067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU11_ECTSI2.480e-1573.08BRO1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56229contigH-elongata_contig56229:1191..1355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56229.13067.1mRNA_H-elongata_contig56229.13067.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56229 1191..1355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56229.13067.1 ID=prot_H-elongata_contig56229.13067.1|Name=mRNA_H-elongata_contig56229.13067.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
ALVAGTTPKTLLARLCLGVVRLLDDSVSAMRRGGGSSQYEKLDAPFLVHI
TFHR*
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