prot_H-elongata_contig5619.13062.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5619.13062.1
Unique Nameprot_H-elongata_contig5619.13062.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length497
Homology
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: D8LMN3_ECTSI (CNOT1_TTP_bind domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 3.120e-180
Identity = 281/326 (86.20%), Postives = 296/326 (90.80%), Query Frame = 0
Query:    1 MRLVPECAPELLGSEDCAFAIAVASVAFGAEVSPMANPLPQPLPSNPLPSLDLDKWCAERLARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGLLPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQASAKQLAEAGKKMHPTLNSLLNPPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQRQGGGG 326
            MRLVP+CA ELLG++DCAFA+AVASV FGAE+ P  N    P      P LDLDKW AERL RKDREVFAA VLSFVQ HFP AR+RQ +QK G+T GEG+LPTCAMSLEA+AILLK+LGATGLVSPAAEALAKKNP IQASAKQLAEAGKKMHPTLN LLNPPEEIESMA+SYFQRIYTAEQSIEEVI MLERFK+SSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGIL GSLIQHQLVSSITLGIALRYVLEALRR PGPD AGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHP+LVEEIERS+QRQGGGG
Sbjct:  661 MRLVPDCAAELLGADDCAFAVAVASVVFGAELPPTPN---APQXXXXXPPLDLDKWGAERLGRKDREVFAARVLSFVQLHFPTARMRQAAQKPGETPGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGGGG 983          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 2.260e-168
Identity = 279/325 (85.85%), Postives = 293/325 (90.15%), Query Frame = 0
Query:    1 MRLVPECAPELLGSEDCAFAIAVASVAFGAEVSPMANPLPQPLPSNPLPSLDLDKWCAERLARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGLLPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQASAKQLAEAGKKMHPTLNSLLNPPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQRQGGG 325
            MRLVP+CA ELLG++DCAFA+AVASV FGAE+ P  N    P        LDLDKW AERL RKDREVFAA VLSFVQ HFP AR+RQ +QK G+T GEG+LPTCAMSLEA+AILLK LGATGLVSPAAEALAKKNP IQASAKQLAEAGKKMHPTLN LLNPPEEIESMA+SYFQRIYTAEQSIEEVI MLERFK+SSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGIL GSLIQHQLVSSITLGIALRYVLEALRR PGPD AGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHP+LVEEIERS+QRQGGG
Sbjct:  689 MRLVPDCAAELLGADDCAFAVAVASVVFGAELPPTPN---SPQXXXXXXXLDLDKWGAERLGRKDREVFAARVLSFVQLHFPTARMRQAAQKPGETPGEGMLPTCAMSLEAAAILLKMLGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGGG 1010          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.280e-79
Identity = 173/375 (46.13%), Postives = 214/375 (57.07%), Query Frame = 0
Query:    2 RLVPECAPELLGSEDCAFAIAVASVAFGAEVSPMANPLPQPLPSNPLPSLDLDKWCAERLARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGLLPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQASAKQLAEAGKKMHPTLNSLLN---------------------------------------------------------PPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSI 319
            R+VPE  P LLGS+D  FAI +A +A+GAE +          P+     +DL+ W +ERL R++ E FAA +LSF+ ++   A  R +SQ Q + +   +  +C + +EA A  L+++   GL  P A AL                  + MHP    L+                                                          P  +I  MA++YFQRIYT+EQSI EV++ML RF+ S D REQ+IFACMVHNLFDEYRFFH YPEKELRITG+LFG LIQ  LVSSITLGIALRYVLEALR+PPGP   GKMFRFGMFALEQFKGRLGEWPQYCSHI  I HL   HP LV E+ER++
Sbjct:  599 RVVPEALPALLGSDDAPFAICLACIAYGAERADA--------PARE--RIDLEAWASERL-RREGEPFAARLLSFLNTNVATALPRDVSQAQANAADGDVGISCMLCIEALAACLRAVA--GL--PGAAALGXXXXXXXXXXXXXXXXXR-MHPAFAQLMGAVATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPASDIMEMANAYFQRIYTSEQSIPEVLEMLRRFQASDDKREQDIFACMVHNLFDEYRFFHKYPEKELRITGVLFGMLIQQGLVSSITLGIALRYVLEALRKPPGPGAEGKMFRFGMFALEQFKGRLGEWPQYCSHIASIQHLAAQHPELVREMERAM 957          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: W7TUR4_9STRA (Ccr4-not transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.990e-78
Identity = 167/332 (50.30%), Postives = 209/332 (62.95%), Query Frame = 0
Query:    1 MRLVPECAPELLGSEDCAFAIAVASVAFGAEVSPMANPLPQPLPSNPLPSLDLDKWCAERLARK-DREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGLLPTCAMSLEASAILLKSLGAT-GLVSPAAEALAKKNPAIQASAKQLAEAGKKMHPT--------LNSLLNPPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQRQ 322
            M LVP    ++L S    F +A+A+ A   E                   L+L+K+ AE+L+   ++E FA   LSFV  H   ARLR  S   G+      +P   +S E+   LLK LG    L    ++   +   A++  +K+  E G                      + IE MA++YFQ+IYT+EQSI +VI+ML+RFK+S D +E EIFACM+ NLFDEYRFFH YPEKELRITGILFGSLIQHQLVSS+TLG+ALRYVLEALRRPPGP NAGK +RFGMFALEQF+GRL EWPQYCSH++QIPHL  NHP LV EIER++ RQ
Sbjct:  585 MLLVPSTQQDVLSSSCTEFVVALAAAAADKE------------------QLNLEKFIAEKLSSSTNKENFARGTLSFVHKHAGHARLR--SAVVGND-----VPPVLLSEESLVSLLKVLGQDPDLRQGGSQVAMEVKQALELYSKRFMEVGSANQGAGAAXXXXXXXXXXXXSDAIEEMANAYFQKIYTSEQSIPDVIEMLKRFKSSKDAKELEIFACMIRNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSLTLGVALRYVLEALRRPPGPGNAGKWYRFGMFALEQFQGRLHEWPQYCSHLIQIPHLRQNHPDLVLEIERAMSRQ 891          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A7S2G852_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G852_9STRA)

HSP 1 Score: 258 bits (660), Expect = 8.950e-78
Identity = 127/163 (77.91%), Postives = 142/163 (87.12%), Query Frame = 0
Query:  165 EEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQRQGGGGG 327
            +EIE MA+SYFQ+IYT+EQSI EVIDML++FKTS + REQEIFACM+HNLFDEYRFFH YPEKELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+ PG    GKMFRFGMFALEQFK RL EWPQYCSHIVQI HL   H  LV+EI+R+++   GGGG
Sbjct:  253 DEIEDMANSYFQKIYTSEQSIAEVIDMLKKFKTSPNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKAPGSGANGKMFRFGMFALEQFKARLYEWPQYCSHIVQIDHLCQQHAELVDEIQRAMKSSKGGGG 415          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A7S2RR73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RR73_9STRA)

HSP 1 Score: 248 bits (632), Expect = 5.350e-77
Identity = 122/150 (81.33%), Postives = 136/150 (90.67%), Query Frame = 0
Query:  171 ADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQ 320
            A+SYFQ+IYT+EQSI EVI+ML+RFKTSS+ REQEIFACM+HNLFDEYRFFH YPEKELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+P     +GKMFRFGMFALEQFK RL EWPQYCSHIVQI +L  NHP LVEEI+R++Q
Sbjct:    1 ANSYFQKIYTSEQSIAEVIEMLKRFKTSSNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKPHW--QSGKMFRFGMFALEQFKARLSEWPQYCSHIVQIDYLNANHPDLVEEIKRAMQ 148          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A1Z5JVQ8_FISSO (CCR4-NOT transcription complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ8_FISSO)

HSP 1 Score: 254 bits (648), Expect = 3.200e-70
Identity = 156/306 (50.98%), Postives = 195/306 (63.73%), Query Frame = 0
Query:   51 LDLDKWCAERLARKDREV-FAASVLSFVQSHFPLARLRQLSQKQGDTSGEGL-LPTCAMSLEASAILLKSLGATGLVSPAAEALAK--KNPAIQASAKQLAEAGKKMHPTLNSLL---NPP---------EEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIE------------RSIQRQGGGGGT 328
            L L  W  E+L  K     FA S++S+++  +  A+ R      G   G  + L    +SL+    LL+SL A+ L  P   +L +      +  + K L +A    HP+L   L   NPP         E++E MA +YFQ+IYT+EQSI +V++ML+RFKTS +++E EIFACMVHNLF+EYRFF+ YPEKELRITGILFG+LIQ QLVSSITLGIALRYVLEALR+PP   + GKMF+FGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV EIE             S+  Q  GGGT
Sbjct:  550 LQLKPWLGEKLTSKGYAAPFAFSLVSYLRKTYAAAKPRV-----GGADGPLVSLENIVISLQ----LLESLEASVLAQPVVGSLDRVLATGTLGENVKSLMDACLTAHPSLRVALSGQNPPTPLAPLTSSEDVEDMATAYFQKIYTSEQSIGDVVEMLKRFKTSGNSKENEIFACMVHNLFNEYRFFNKYPEKELRITGILFGALIQEQLVSSITLGIALRYVLEALRKPPETTSTGKMFKFGMFALEQFKGRLHEWPQYCSHIVQIPHLKEKYAELVAEIESEMNKSQKRGSGNSVDSQSSGGGT 846          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A7S4W626_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W626_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.200e-70
Identity = 146/283 (51.59%), Postives = 194/283 (68.55%), Query Frame = 0
Query:   53 LDKWCAER--LARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGL--LPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQA--SAKQLAEAGKKMHPTLNSLLNPP----EEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPD------NAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSI 319
            L +W +ER      +R VF  S++++      L+R    +  + +  G  L  +   A SL+    L  ++ +  + +PA+++    + ++    S K+L +A   +HP+LN+++       ++IE MA+SYFQ+IYT+EQSI EV++ML+RFK S + RE +IFACM+HNLFDEYRFF  YPEKELRITGILFG LIQHQLVSSITLGIALRYVLEALR+PP P       N+GKMFRFGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV+EIE ++
Sbjct:  436 LREWFSERRNATAVERNVFVLSLIAY------LSRTHTAALARNNDGGPPLVSIENIATSLQFLQGLDNAILSQQISNPASQSAENSSSSLTIGDSVKRLIDACVSVHPSLNNVIKQTSGNADDIEEMANSYFQKIYTSEQSIIEVVEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 712          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A7S4RY41_9STRA (Hypothetical protein n=10 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RY41_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.460e-70
Identity = 146/283 (51.59%), Postives = 194/283 (68.55%), Query Frame = 0
Query:   53 LDKWCAER--LARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGL--LPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQA--SAKQLAEAGKKMHPTLNSLLNPP----EEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGPD------NAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSI 319
            L +W +ER      +R VF  S++++      L+R    +  + +  G  L  +   A SL+    L  ++ +  + +PA+++    + ++    S K+L +A   +HP+LN+++       ++IE MA+SYFQ+IYT+EQSI EV++ML+RFK S + RE +IFACM+HNLFDEYRFF  YPEKELRITGILFG LIQHQLVSSITLGIALRYVLEALR+PP P       N+GKMFRFGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV+EIE ++
Sbjct:  703 LREWFSERRNATAVERNVFVLSLIAY------LSRTHTAALARNNDGGPPLVSIENIATSLQFLQGLDNAILSQQISNPASQSAENSSSSLTIGDSVKRLIDACVSVHPSLNNVIKQTSGNADDIEEMANSYFQKIYTSEQSIIEVVEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 979          
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Match: A0A7S2UP57_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP57_9STRA)

HSP 1 Score: 244 bits (623), Expect = 6.700e-67
Identity = 148/309 (47.90%), Postives = 195/309 (63.11%), Query Frame = 0
Query:   51 LDLDKWCAERLARKD--------REVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEGLLPTCAMSLEASAILLKSLGAT--GLVSPAAEAL-------AKKNPAIQASAKQLAEAGKKMHPTLNSLLN-----------------PPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRPPGP-----DNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPSLVEEIERSIQ 320
            L L  W +ER++  +        R +FA +++S++   +  A  R      G+ SG+G   T  +S+E  ++ L+ L      ++S A  +        + +   +  S K L +A    H +L+SL++                   ++IE MA+SYFQ+IYT+EQSI EVI+ML+RFK S + RE +IFACM+HNLFDEYRFF  YPEKELRITGILFG LIQ QLVSSITLGIALRYVLEALR+PP P      N+GKMFRFGMFALEQFK RL EWPQYCSHIVQIP+L   + +LV EIE +++
Sbjct:  709 LQLSAWLSERMSTMNSSGSTGNGRVIFAIAIVSYIGKMYASALSR------GNHSGKG---TPLVSIENISVCLQFLNGLDKNVLSQALPSSLSGGGDSSNRGMLLGESVKALTDACMSAHTSLSSLMSNSSSAPSSSRTPTPTSGSTDDIEEMANSYFQKIYTSEQSIGEVIEMLKRFKVSGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGQLIQQQLVSSITLGIALRYVLEALRKPPSPPGSTTSNSGKMFRFGMFALEQFKSRLHEWPQYCSHIVQIPYLREGYGALVNEIEEAME 1008          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5619.13062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN3_ECTSI3.120e-18086.20CNOT1_TTP_bind domain-containing protein (Fragment... [more]
A0A6H5JXN6_9PHAE2.260e-16885.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHM2_9STRA1.280e-7946.13CCR4-Not complex component, Not1-domain-containing... [more]
W7TUR4_9STRA1.990e-7850.30Ccr4-not transcription n=2 Tax=Monodopsidaceae Tax... [more]
A0A7S2G852_9STRA8.950e-7877.91Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2RR73_9STRA5.350e-7781.33Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1Z5JVQ8_FISSO3.200e-7050.98CCR4-NOT transcription complex subunit 1 n=2 Tax=F... [more]
A0A7S4W626_9STRA4.200e-7051.59Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RY41_9STRA4.460e-7051.59Hypothetical protein n=10 Tax=Ditylum brightwellii... [more]
A0A7S2UP57_9STRA6.700e-6747.90Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..432
NoneNo IPR availablePANTHERPTHR13162:SF8CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1coord: 51..416
IPR032193CCR4-NOT transcription complex subunit 1, TTP binding domainPFAMPF16417CNOT1_TTP_bindcoord: 134..322
e-value: 4.4E-73
score: 244.5
IPR038535CCR4-NOT subunit 1, TTP binding domain superfamilyGENE3D1.25.40.840coord: 151..324
e-value: 9.7E-68
score: 228.9
IPR040398CCR4-NOT transcription complex subunit 1PANTHERPTHR13162CCR4-NOT TRANSCRIPTION COMPLEXcoord: 51..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5619contigH-elongata_contig5619:668..3626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5619.13062.1mRNA_H-elongata_contig5619.13062.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5619 656..3626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5619.13062.1 ID=prot_H-elongata_contig5619.13062.1|Name=mRNA_H-elongata_contig5619.13062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=497bp
MRLVPECAPELLGSEDCAFAIAVASVAFGAEVSPMANPLPQPLPSNPLPS
LDLDKWCAERLARKDREVFAASVLSFVQSHFPLARLRQLSQKQGDTSGEG
LLPTCAMSLEASAILLKSLGATGLVSPAAEALAKKNPAIQASAKQLAEAG
KKMHPTLNSLLNPPEEIESMADSYFQRIYTAEQSIEEVIDMLERFKTSSD
TREQEIFACMVHNLFDEYRFFHNYPEKELRITGILFGSLIQHQLVSSITL
GIALRYVLEALRRPPGPDNAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQ
IPHLVGNHPSLVEEIERSIQRQGGGGGTGAVAGAPSGPHGSVSVSEASSL
GGQQQQQTHRQQQLHQQHQQPLHQQAQQQHQLQQQHQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQRYGGRAQSVDLGQQQHQH
QQSLSQQQQPQTRQQQQQQSRQDQQPQQLPQQSQPQQQQQPQTRHQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032193CNOT1_TTP_bind
IPR038535CNOT1_TTP_bind_sf
IPR040398CNOT1