prot_H-elongata_contig56171.13060.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56171.13060.1
Unique Nameprot_H-elongata_contig56171.13060.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length119
Homology
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BLAST of mRNA_H-elongata_contig56171.13060.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 4.330e-6
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:    1 MIDVVKKRCTGEGCFKQPMYRVVGSKKAEYCVVHSLEGMI 40
            M+DVV KRC   GC K+P Y   GSKKAE C  H+L+GM+
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56171.13060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI4.330e-657.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56171contigH-elongata_contig56171:796..1152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56171.13060.1mRNA_H-elongata_contig56171.13060.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56171 796..1152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56171.13060.1 ID=prot_H-elongata_contig56171.13060.1|Name=mRNA_H-elongata_contig56171.13060.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=119bp
MIDVVKKRCTGEGCFKQPMYRVVGSKKAEYCVVHSLEGMINDKRKMCDKD
ECFRQPSHGVAGSKKPEYCAVHDLEGMIGVVNNICARDGCMKRLSYGLAG
SKKAEYGAVHALQGIIDVA
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