prot_H-elongata_contig5617.13059.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5617.13059.1
Unique Nameprot_H-elongata_contig5617.13059.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A6H5JER7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER7_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 4.960e-74
Identity = 115/183 (62.84%), Postives = 137/183 (74.86%), Query Frame = 0
Query:    2 YRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPP--------------EDRCGNHN--------AAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            YRR+A LKGHSSR+LHLDWT DGRFVHTCGQDY +LHW+ILPP              EDR  ++         A  G  RPR+F+R FL+R+  W+TWSST+GWPVQGVFP Y+DNTEVNAVD+C   DLLA ADDA+T+RL+R+P LRGGA  ++YTAHSSHVM ARF VG+EP RL+TLGG
Sbjct:  614 YRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDGAARDGGEDRDASNGXXXXXXDEAFAGESRPRIFKRAFLVRNEPWATWSSTIGWPVQGVFPAYSDNTEVNAVDLCKDRDLLAAADDAKTVRLLRYPVLRGGARNRSYTAHSSHVMGARFTVGLEPTRLITLGG 796          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: D7G7I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I2_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 5.520e-72
Identity = 114/183 (62.30%), Postives = 135/183 (73.77%), Query Frame = 0
Query:    2 YRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPE----------------DRCG------NHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            YRR+A LKGHSSR+LHLDWT DGRFVHTCGQDY +LHW+ILPP                 D C       +  A  G  RPR+F+R FL+R+  W+TWSST+GWPVQGVFP Y+DNTEVNAVD+C   +LLA ADDA+T+RL+R+P LRGGA  ++YTAHSSHVM ARF VGVEP RL+TLGG
Sbjct: 1478 YRRIAHLKGHSSRVLHLDWTEDGRFVHTCGQDYHLLHWDILPPSSHRQGDDAVRDGGAGRDACNGGGDEEDDEAFAGESRPRIFKRAFLVRNEPWATWSSTIGWPVQGVFPAYSDNTEVNAVDLCKDRELLAAADDAKTVRLLRYPVLRGGARNRSYTAHSSHVMGARFTVGVEPTRLITLGG 1660          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: C1N8S3_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N8S3_MICPC)

HSP 1 Score: 129 bits (325), Expect = 9.140e-32
Identity = 69/163 (42.33%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    2 YRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLD--LLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            Y+R    KGHSS I H+DW+ D RF+ +   DYE+LHWE+   E                  + P  LRD +W TW+ TLGWPVQG++P++ D T+VNA   C   D  ++ATADD   I+L R+P+  G A    Y  HS+H  NARF    E   L+T GG
Sbjct:  471 YKRAGVCKGHSSYITHIDWSEDSRFLQSNSGDYELLHWEVPGCEQ----------------IRFPAALRDTKWDTWTCTLGWPVQGIWPKHADGTDVNAC--CRSFDGQVVATADDFGLIKLFRYPSDVGRADYHGYLGHSTHATNARFSYNDE--FLITTGG 613          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: C1E2H3_MICCC (Uncharacterized protein n=5 Tax=cellular organisms TaxID=131567 RepID=C1E2H3_MICCC)

HSP 1 Score: 127 bits (319), Expect = 5.870e-31
Identity = 69/163 (42.33%), Postives = 93/163 (57.06%), Query Frame = 0
Query:    2 YRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLD--LLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            ++RV   KGHSS I HLDW+ D R++ T   DYE++ WEI   E                  + P  L+D +W +W+STLGWPVQGV+P++ D T+VNA   C   D  ++ATADD   ++L R+P+  G A    Y  HSSHV N RF    E   L+T+GG
Sbjct:  526 FKRVGVCKGHSSYITHLDWSEDSRYLQTNSGDYELMFWEIPGCEQ----------------VKFPTALKDTKWDSWTSTLGWPVQGVWPKHADGTDVNAC--CRSADGTVVATADDFGLVKLFRYPSDVGRADYHGYLGHSSHVTNCRFSYNDE--FLITVGG 668          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A7S0SF10_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SF10_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 2.030e-30
Identity = 70/163 (42.94%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    2 YRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLD--LLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            Y+RV   KGHSS + HLDW+ D R + T   DYE+L WEI   E                  + P  L+D +W TW++TLGWPVQGV+P++ D T+VNA   C   D  ++ATADD   ++L R+P+  G A    Y  HS+HV N RF    E   LVT GG
Sbjct:  565 YKRVGVCKGHSSYVTHLDWSEDSRHLQTNSGDYELLFWEIPGCEQ----------------IKFPAALKDTRWDTWTATLGWPVQGVWPKHADGTDVNAC--CRSGDGMVVATADDFGLVKLFRYPSDVGRADYHGYLGHSAHVTNCRFSYNDE--FLVTTGG 707          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A5K4F4J9_SCHMA (ANAPC4_WD40 domain-containing protein n=1 Tax=Schistosoma mansoni TaxID=6183 RepID=A0A5K4F4J9_SCHMA)

HSP 1 Score: 124 bits (312), Expect = 3.400e-30
Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    1 RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            +Y RV    GH+S ILH+DW+ DGRF+ +   DYE+L W                  F  R    P  LRD +W++ + TLGW V G++P  +D T+VNA D  P  D+LAT DD   ++L ++P  +  A  +AY  HSSHV N  FL   +  RL++ GG
Sbjct:  455 KYNRVGRCCGHTSFILHIDWSVDGRFIRSVSGDYEILFWTA----------------FDCRQVVSPSTLRDLEWASQTCTLGWEVAGIWPSDSDGTDVNACDRSPTADILATGDDYGKVKLFKYPTNKPKAEFRAYNGHSSHVTNVTFLY--DGSRLISTGG 598          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: Q5D9U5_SCHJA (SJCHGC06428 protein n=1 Tax=Schistosoma japonicum TaxID=6182 RepID=Q5D9U5_SCHJA)

HSP 1 Score: 120 bits (301), Expect = 4.840e-30
Identity = 63/162 (38.89%), Postives = 88/162 (54.32%), Query Frame = 0
Query:    1 RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            +Y RV    GH+S ILH+DW+ D RF+ +   DYE+L+W                  F  R    P  LRD +W++ + TLGW V G++P  +D T++NA D     D+LAT DD   ++L+R PA    A  +AY  HSSHV N  FL   +  RL++ GG
Sbjct:  164 KYNRVGRCCGHTSFILHIDWSADSRFLRSVSGDYEILYWTA----------------FDCRQVVSPSTLRDLEWASQTCTLGWEVAGIWPSDSDGTDINACDHSSAADILATGDDFGKVKLLRCPANAPKAEFRAYNGHSSHVTNVTFLY--DGSRLISTGG 307          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A5K4EU92_SCHMA (Putative WD-repeat protein n=4 Tax=Schistosoma TaxID=6181 RepID=A0A5K4EU92_SCHMA)

HSP 1 Score: 124 bits (312), Expect = 4.860e-30
Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    1 RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            +Y RV    GH+S ILH+DW+ DGRF+ +   DYE+L W                  F  R    P  LRD +W++ + TLGW V G++P  +D T+VNA D  P  D+LAT DD   ++L ++P  +  A  +AY  HSSHV N  FL   +  RL++ GG
Sbjct:  685 KYNRVGRCCGHTSFILHIDWSVDGRFIRSVSGDYEILFWTA----------------FDCRQVVSPSTLRDLEWASQTCTLGWEVAGIWPSDSDGTDVNACDRSPTADILATGDDYGKVKLFKYPTNKPKAEFRAYNGHSSHVTNVTFLY--DGSRLISTGG 828          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A3Q0KRN3_SCHMA (Putative WD-repeat protein n=4 Tax=Schistosoma TaxID=6181 RepID=A0A3Q0KRN3_SCHMA)

HSP 1 Score: 124 bits (312), Expect = 5.010e-30
Identity = 64/162 (39.51%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    1 RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            +Y RV    GH+S ILH+DW+ DGRF+ +   DYE+L W                  F  R    P  LRD +W++ + TLGW V G++P  +D T+VNA D  P  D+LAT DD   ++L ++P  +  A  +AY  HSSHV N  FL   +  RL++ GG
Sbjct:  895 KYNRVGRCCGHTSFILHIDWSVDGRFIRSVSGDYEILFWTA----------------FDCRQVVSPSTLRDLEWASQTCTLGWEVAGIWPSDSDGTDVNACDRSPTADILATGDDYGKVKLFKYPTNKPKAEFRAYNGHSSHVTNVTFLY--DGSRLISTGG 1038          
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Match: A0A4Z2DGX0_SCHJA (Echinoderm microtubule-associated protein-like 1 isoform 2 n=3 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DGX0_SCHJA)

HSP 1 Score: 122 bits (307), Expect = 2.350e-29
Identity = 63/162 (38.89%), Postives = 89/162 (54.94%), Query Frame = 0
Query:    1 RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGNHNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNAVDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLVGVEPMRLVTLGG 162
            +Y RV    GH+S ILH+DW+ D RF+ +   DYE+L+W                  F  R    P  LRD +W++ + TLGW V G++P  +D T++NA D     D+LAT DD   ++L R+PA +  A  +AY  HSSHV N  FL   +  RL++ GG
Sbjct:  863 KYNRVGRCCGHTSFILHIDWSADSRFLRSVSGDYEILYWTA----------------FDCRQVVSPSTLRDLEWASQTCTLGWEVAGIWPSDSDGTDINACDHSSAADILATGDDFGKVKLFRYPANKPKAEFRAYNGHSSHVTNVTFLY--DGSRLISTGG 1006          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5617.13059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JER7_9PHAE4.960e-7462.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I2_ECTSI5.520e-7262.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
C1N8S3_MICPC9.140e-3242.33Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
C1E2H3_MICCC5.870e-3142.33Uncharacterized protein n=5 Tax=cellular organisms... [more]
A0A7S0SF10_9CHLO2.030e-3042.94Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A5K4F4J9_SCHMA3.400e-3039.51ANAPC4_WD40 domain-containing protein n=1 Tax=Schi... [more]
Q5D9U5_SCHJA4.840e-3038.89SJCHGC06428 protein n=1 Tax=Schistosoma japonicum ... [more]
A0A5K4EU92_SCHMA4.860e-3039.51Putative WD-repeat protein n=4 Tax=Schistosoma Tax... [more]
A0A3Q0KRN3_SCHMA5.010e-3039.51Putative WD-repeat protein n=4 Tax=Schistosoma Tax... [more]
A0A4Z2DGX0_SCHJA2.350e-2938.89Echinoderm microtubule-associated protein-like 1 i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..40
e-value: 0.0031
score: 26.7
coord: 82..123
e-value: 9.5
score: 10.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 8..41
score: 10.041
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..162
e-value: 2.1E-29
score: 104.4
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 3..162
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 3..162
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 8..49
score: 8.677
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 5..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5617contigH-elongata_contig5617:2315..3348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5617.13059.1mRNA_H-elongata_contig5617.13059.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5617 2315..3348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5617.13059.1 ID=prot_H-elongata_contig5617.13059.1|Name=mRNA_H-elongata_contig5617.13059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
RYRRVACLKGHSSRILHLDWTTDGRFVHTCGQDYEVLHWEILPPEDRCGN
HNAAGGNFRPRVFQRPFLLRDAQWSTWSSTLGWPVQGVFPRYTDNTEVNA
VDVCPGLDLLATADDARTIRLMRFPALRGGAWGKAYTAHSSHVMNARFLV
GVEPMRLVTLGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf