prot_H-elongata_contig56131.13057.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56131.13057.1
Unique Nameprot_H-elongata_contig56131.13057.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
BLAST of mRNA_H-elongata_contig56131.13057.1 vs. uniprot
Match: D7FGW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW3_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 2.920e-42
Identity = 125/299 (41.81%), Postives = 162/299 (54.18%), Query Frame = 0
Query:    1 QDTDNSWNSRLTPMTRLLIAAGLSSSGVRAVHFIEDHQATFSY--PSTQERIRSETKAG-----GGVRGRKEDPFSRPLEGQIGVLRLDR---RSEFMVTSAEEGQSLDDVNRLSIAAPVV----YEANGRRDNS-NGRGGGG-ECVKFVTDVGSLGQEDQRKWFPEDRDARELLLALDNFCPISWLRRE------------KAETDDGDEDMVGEM------AWREVDRGVIWAGEAPGVYRR-------------RNPGALISNRKDDKRKVIIYQRDRDRKLLKSKEVRSVLGLLL 252
            +D+D SWNSRL+PMTRLL+AAGLSS GVR VHF++ + A+FSY  PS+                GG     E   S P  GQ GVL LD     S+F+V++    Q L D  RL+++AP+     ++  G  D +  GRGGG  ECVKFV  VG  GQ+ + KWFPE+ D RELL ALD+FCPI+WLR+E            K   DDGDE   G +      A  +  RG    G   G+Y               R   A    R+ + RK++IYQRDRDRKLLK++E+   L + L
Sbjct:   38 KDSDTSWNSRLSPMTRLLVAAGLSSVGVRDVHFVDGNHASFSYAAPSSXXXXXXXXXXXXXALRGGSSSSSEIGDS-PRPGQTGVLHLDEIGYMSQFVVSTE---QPLPD--RLAVSAPLSPVRRWDGGGAEDVAIEGRGGGARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXGKKGVDDGDEGTGGLVSPLPAGAGGDEFRGAGGRGSR-GLYATVVGGPERGFAGGGRGFRAGAKKRQPEPRKLVIYQRDRDRKLLKTEELMDELWIRL 328          
BLAST of mRNA_H-elongata_contig56131.13057.1 vs. uniprot
Match: A0A6H5JCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF3_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 6.690e-39
Identity = 120/299 (40.13%), Postives = 163/299 (54.52%), Query Frame = 0
Query:    1 QDTDNSWNSRLTPMTRLLIAAGLSSSGVRAVHFIEDHQATFSYPSTQERIRSE-------TKAGGGVRGRKEDPFSRPLEGQIGVLRLDR---RSEFMVTSAEEGQSLDDVNRLSIAAPVV----YEANGRRDNS-NGRGGGG-ECVKFVTDVGSLGQEDQRKWFPEDRDARELLLALDNFCPISWLRREKAE-------------TDDGDED---MVGEM---AWREVDRGV-------IWAGEAPGVYRR-----RNPGALISNRKDDKRKVIIYQRDRDRKLLKSKEVRSVLGLLL 252
            +D+D SWNSRL+PMTRLLIAAGLSS GV  VHF++ + A+FS+                 T   GG+   +     RP  GQ GVL LD     S+F+V++    Q L D  RL+++AP+     ++  G  + +  GRGGG  ECVKFV  VG  GQ+ + KWFPE+ D RELL ALD+FCPI+WLR+E+                D GDE    +V  +   A R+  RG        ++A    G  R      R  GA    R+ + RK++IYQRDR+RKLLK++E+   L + L
Sbjct:  199 KDSDTSWNSRLSPMTRLLIAAGLSSVGVHDVHFVDGNHASFSFXXXXXXXXXXXXXXXXXTALRGGISSSEIGDSPRP--GQTGVLHLDEIGYMSQFVVSTE---QPLPD--RLAVSAPLSPVRRWDGGGVENVAIEGRGGGARECVKFVDTVGDWGQK-RDKWFPEEEDPRELLRALDSFCPIAWLRKEEXXXXXXXXXXXGRRGVDGGDEGTGALVSPLPAGAGRDEFRGAGGRGSRGLYATVVAGPERGAAGGGRGFGAGAKKRQPEPRKLVIYQRDRNRKLLKTEELMDELWIRL 489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56131.13057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGW3_ECTSI2.920e-4241.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCF3_9PHAE6.690e-3940.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56131contigH-elongata_contig56131:2497..3336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56131.13057.1mRNA_H-elongata_contig56131.13057.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56131 2497..3336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56131.13057.1 ID=prot_H-elongata_contig56131.13057.1|Name=mRNA_H-elongata_contig56131.13057.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
QDTDNSWNSRLTPMTRLLIAAGLSSSGVRAVHFIEDHQATFSYPSTQERI
RSETKAGGGVRGRKEDPFSRPLEGQIGVLRLDRRSEFMVTSAEEGQSLDD
VNRLSIAAPVVYEANGRRDNSNGRGGGGECVKFVTDVGSLGQEDQRKWFP
EDRDARELLLALDNFCPISWLRREKAETDDGDEDMVGEMAWREVDRGVIW
AGEAPGVYRRRNPGALISNRKDDKRKVIIYQRDRDRKLLKSKEVRSVLGL
LL
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