prot_H-elongata_contig56124.13055.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56124.13055.1
Unique Nameprot_H-elongata_contig56124.13055.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length310
Homology
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 2.040e-130
Identity = 210/319 (65.83%), Postives = 243/319 (76.18%), Query Frame = 0
Query:    3 LTTLLAIGSAISILPPLVRAALPPSVASLPVSAPLDAVLSKIFPQTWENDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSITDPSKQYPFSVLGLGDIVIPATFCTLMRLALKSIFAILPRGTNLLYRSPSFDQQLEGARQAEAAAARALVDKVSSKNPVALWLDSFLGTPFSKAPLPENSMGRVSTLPAIGGGGGGDVIPPGERVE-----------GRGRSYFQSSVAAYALGLGLCFTVNFLSRSGQP 310
            LTT L + +++S+LPP++R+ LP +V  +PVSAPLD VL+K FP+TWENDDQPLLDFAEL+VL+SA+SAAFVY+NP VGLSAKFLIPN+FAWCIGMQSIGLISIS+F  AA+LL GLFCYDIFWVFGTEVMMTVAT+IEAPVKFLFPS+TDPSK+YPFSVLGLGDIVIPATFCTLMR                     SFD  LEGARQAEAAAARAL+ +V +KNP+ALWLDS LGTP ++A         VS     G       IPPG R+            G GRSYF +SVAAYA+GLGLCFTVNF+S+SGQP
Sbjct:  189 LTTFLGVATSVSVLPPILRSVLPDNVVKVPVSAPLDTVLAKAFPETWENDDQPLLDFAELAVLVSAISAAFVYINPSVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMR---------------------SFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGS------GVSEASPKG-------IPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQP 473          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.340e-37
Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 0
Query:   51 NDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSITDPSKQYPFSVLGLGDIVIPATFCTLMRLALKSI 185
            + D+  +    ++ L  A + A  Y+ P   L   F++ N  AWCIGMQ+IGLI+I SF TA V L GLF YDI+WVFGT+VM+TVATR EAPVKF+FP   D  + YPF+VLGLGDIVIPA   +L+R   KS+
Sbjct:   35 DQDERGVRLPAVAALAVATAGAAAYLYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSL 169          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV)

HSP 1 Score: 138 bits (347), Expect = 2.480e-34
Identity = 86/164 (52.44%), Postives = 103/164 (62.80%), Query Frame = 0
Query:   18 PLVRAALPPSVASLPVSAPLD-AVLSKIFPQTWENDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF--PSITDPSKQYPFSVLGLGDIVIPATFCTLM 178
            P++R  LP S A   V  P   A   K+ P T   D    L       L +A+SAA+      V +S KFL+ N  AW I M S+G IS+ SF TAA+LLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+  P   +P K YPFSVLGLGD+VIP  F   M
Sbjct:  147 PILRNVLPESFAEAEVEVPEKLAKAIKLAPPTLPVDGLATL------ALGAALSAAYW---APVAMSQKFLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEP-KPYPFSVLGLGDVVIPGLFVRFM 300          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.550e-33
Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 0
Query:   18 PLVRAALPPSVASLPVSAPLDAVLSKIFPQTWENDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSI-TDPSKQYPFSVLGLGDIVIPATFCTLM 178
            P++R  LPPS +   V  P D +  K+        D P L    L  L   +    +Y  P V +  KF++ N+ AW + M S+G IS+ SF TA +LL GLFCYDIFWVFGTEVMMTVAT++EAP+KFL+P+  ++  + YPFSVLGLGD+VIP  F  LM
Sbjct:  194 PILRNILPPSFSEKEVQVPKD-IAQKL------ELDPPTLPLDGLVTLGLGLLCTAIYWAP-VAMEQKFILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLM 347          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S1BCW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCW1_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.540e-32
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 0
Query:   18 PLVRAALP-PSVASLPVSAPLDAVLSKIFPQTWENDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSITDPS--KQYPFSVLGLGDIVIPATFCTLM 178
            PL+RAA+P    A   +S P    + K    T E+ +   LD   +  L   ++   +Y +P + ++ KFL+ N+ AW IGM S+  ++ISSF T A+LL GLF YDIFWVFGTEVMMTVAT+IEAPVKFL+ ++      ++YPFSVLGLGDIVIP  F  ++
Sbjct:  225 PLLRAAVPWDDFADKQISVPKP--VGKFLSSTSESQETLPLD--GVLALGLGIALLAIYWSPAIAITDKFLVSNVMAWSIGMVSLAAVNISSFQTGAILLGGLFFYDIFWVFGTEVMMTVATKIEAPVKFLYYTVPPDGIPREYPFSVLGLGDIVIPGLFVRML 384          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 9.440e-32
Identity = 77/164 (46.95%), Postives = 102/164 (62.20%), Query Frame = 0
Query:   18 PLVRAALPPSVASLPVSAPLDAVLSKIFPQTWENDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF---PSITDPSKQYPFSVLGLGDIVIPATFCTLM 178
            PL+R  +P S A   V  P + +  K+        + P L    L+ L   +     Y +P V ++ KF++ N+ AW + M S+G IS+ SF T A+LLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+   P + +  K YPFSVLGLGD+VIP  F   M
Sbjct:  273 PLLRNVVPDSFAKGEVEVP-EPLAEKL------KLNPPTLPVDGLTTLALGIVCTLAYWSP-VAMTQKFMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAE-GKSYPFSVLGLGDVVIPGLFVRFM 427          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.430e-29
Identity = 65/106 (61.32%), Postives = 75/106 (70.75%), Query Frame = 0
Query:   74 VYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSI-TDPSKQYPFSVLGLGDIVIPATFCTLM 178
            VY  P V L  KFLI N  AW +GM S+G        T A+LLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+ +  +D  K YPFSVLGLGD+VIP  F   M
Sbjct:  235 VYWTP-VALENKFLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFM 339          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S1BDN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDN0_9STRA)

HSP 1 Score: 114 bits (286), Expect = 6.150e-28
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 0
Query:   85 KFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSITDPS--KQYPFSVLGLGDIVIPATFCTLM 178
             F    + AW IGM S+  ++ISSF T A+LL GLF YDIFWVFGTEVMMTVAT+IEAPVKFL+ ++      ++YPFSVLGLGDIVIP  F  ++
Sbjct:   20 NFCSNKVMAWSIGMVSLAAVNISSFQTGAILLGGLFFYDIFWVFGTEVMMTVATKIEAPVKFLYYTVPPDGIPREYPFSVLGLGDIVIPGLFVRML 115          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S1XEF9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEF9_9RHOD)

HSP 1 Score: 115 bits (289), Expect = 4.600e-26
Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 0
Query:   49 WENDD----QPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFP----SITDPSKQYPFSVLGLGDIVIPATFCTL 177
            W+ DD    +    F   S L+   +AA   ++ E      FL+ N+ AW I  ++I LI  SSF  AA LL GLF YD+FWVFGT+VM+TVA  I+AP KFLFP    S  DPS  YP++VLGLGDIV+P+ F +L
Sbjct:  139 WKKDDASSQEGFYGFQAASWLLGLSTAAAYALHVE----PNFLLNNILAWGIAARTISLIQPSSFLVAAGLLTGLFLYDVFWVFGTDVMVTVAMAIDAPAKFLFPRDLSSYADPSSVYPYAVLGLGDIVVPSLFASL 271          
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Match: A0A7S3Y2U4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2U4_HETAK)

HSP 1 Score: 108 bits (270), Expect = 2.640e-23
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 0
Query:   62 LSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQSIGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPSITDPS--------KQYPFSVLGLGDIVIPATFC 175
            L     A  AAF Y++P   L+  +   N  AW I +QS+GLI+ +SF TA + L GLF YD++WV+GT+VM+TVA +++AP+KFL+P   DP+          YPFSVLGLGD+VIP  FC
Sbjct:  273 LGAAAGAALAAF-YLSPLPALTT-WEANNFLAWAIAIQSLGLITPASFGTACLFLGGLFLYDVWWVYGTDVMLTVALKVDAPIKFLYPK--DPTLVAQGLAGSDYPFSVLGLGDVVIPGIFC 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56124.13055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXB8_9PHAE2.040e-13065.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS42_9STRA3.340e-3753.33Signal peptide peptidase-domain-containing protein... [more]
A0A7S1Z2G9_TRICV2.480e-3452.44Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A6U0R1W4_9STRA1.550e-3348.15Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1BCW1_9STRA1.540e-3247.56Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S4IZL8_9STRA9.440e-3246.95Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2MA48_9STRA9.430e-2961.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1BDN0_9STRA6.150e-2860.42Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1XEF9_9RHOD4.600e-2648.18Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3Y2U4_HETAK2.640e-2348.36Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007369Peptidase A22B, signal peptide peptidasePFAMPF04258Peptidase_A22Bcoord: 3..178
e-value: 2.7E-30
score: 105.9
IPR007369Peptidase A22B, signal peptide peptidasePANTHERPTHR12174SIGNAL PEPTIDE PEPTIDASEcoord: 33..310
NoneNo IPR availablePANTHERPTHR12174:SF23MINOR HISTOCOMPATIBILITY ANTIGEN H13coord: 33..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 306..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.618
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56124contigH-elongata_contig56124:959..3301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56124.13055.1mRNA_H-elongata_contig56124.13055.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56124 959..3301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56124.13055.1 ID=prot_H-elongata_contig56124.13055.1|Name=mRNA_H-elongata_contig56124.13055.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=310bp
QVLTTLLAIGSAISILPPLVRAALPPSVASLPVSAPLDAVLSKIFPQTWE
NDDQPLLDFAELSVLISAVSAAFVYVNPEVGLSAKFLIPNLFAWCIGMQS
IGLISISSFTTAAVLLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPS
ITDPSKQYPFSVLGLGDIVIPATFCTLMRLALKSIFAILPRGTNLLYRSP
SFDQQLEGARQAEAAAARALVDKVSSKNPVALWLDSFLGTPFSKAPLPEN
SMGRVSTLPAIGGGGGGDVIPPGERVEGRGRSYFQSSVAAYALGLGLCFT
VNFLSRSGQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007369Peptidase_A22B_SPP