prot_H-elongata_contig56108.13051.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56108.13051.1
Unique Nameprot_H-elongata_contig56108.13051.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length357
Homology
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: D7G3W3_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.090e-43
Identity = 164/352 (46.59%), Postives = 189/352 (53.69%), Query Frame = 0
Query:   16 NQGRWTDSGQPLTAAEGRTVLPMLEHVEEAIVTRLLPSQATLESTQAQAALQHLAGDGASAGAEAKEEKEEQVGDADGAGASSLEASAARDNVTAMVERSMESAPAADGGXXXXXXXXXXXGPTA--LGMAVVGTSEATVAPAIVNPTAMAVEDSASASEGEAVAVLASSLSLSPSREAA------EAVTAAGLAPALVAEPPXXXXSARSEEKGDQDPGTXXXXXXXAPASGAPFSIVLIFRFFFSQEDQAELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREA--QSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRERMPLQ 357
            N GRWTD+GQPL  AEGRTV+PML   ++A    LLPS A                         +E              S++E+ A                 A +    XXXXXXXXX   A   G A +                MAVED+AS SEGEAVA LASSLSLSP RE A       AVTAAG   +    PP    +   E +G  + G          A+GA F+++L       QEDQAELLEAAGLDPEALAALP +MRREVLEQEARNRRMREA   +  P DPSRA++MDNASFVA          LLSADDALL TLPP+LVAEAMVMRER+P Q
Sbjct:  386 NGGRWTDNGQPLPLAEGRTVIPMLAQGDQAFFALLLPSHALKGGGXXXXXXXXXXXXXXXXXXXPRE--------------SAMESVAXXXXXXXXXXXXXXXVAAXEXVVEXXXXXXXXXXXRARVAGEARLXXXXXXXXXXXXXXXXMAVEDTASVSEGEAVAALASSLSLSPRREPAGETATTPAVTAAG---SDAGAPPT---AGSLETRGAAEEGGNDG------AAGAGFALLL------QQEDQAELLEAAGLDPEALAALPADMRREVLEQEARNRRMREAPGNAGGPVDPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPNLVAEAMVMRERIPHQ 705          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.840e-19
Identity = 65/106 (61.32%), Postives = 69/106 (65.09%), Query Frame = 0
Query:  254 SQEDQAELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREA--QSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRERMPLQ 357
            S EDQAELLEAA                  LEQEARNRRMREA   +  PADPSRA++MDNASFVA          LLSADDALL TLPP LVAEAMVMRER+P Q
Sbjct:  542 SMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNAGGPADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERIPHQ 647          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A7S4D520_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D520_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 9.120e-18
Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 0
Query:  259 AELLEAA---GLDPEALAALPPEMRREVLEQEARNR---RMREAQSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            AEL  AA   GLDPEALAALP +MR+EVL QEA  R   R R  ++  PADP+RA +MDNASFVA          LL+AD   L +LPP LVAEA ++RER
Sbjct:   11 AELAAAARSSGLDPEALAALPEDMRQEVLAQEAAERDRQRRRAEENEAPADPARAQEMDNASFVASLDPQLRREVLLTADAEFLRSLPPDLVAEANLLRER 111          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A7S4HZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZ14_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.280e-17
Identity = 54/95 (56.84%), Postives = 65/95 (68.42%), Query Frame = 0
Query:  260 ELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQ-SVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            +L   + LDPEALAALP EMR  V+EQE R RR RE + S PPADPS A +MDNASFVA          LL+ADDA L +LPP + +EA ++RER
Sbjct:  229 QLDSTSALDPEALAALPEEMRXXVIEQERRERRAREEERSEPPADPSNAEEMDNASFVASLAPDLREEILLTADDAFLGSLPPDMQSEAQILRER 323          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A7S2QUU6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUU6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.080e-15
Identity = 54/102 (52.94%), Postives = 70/102 (68.63%), Query Frame = 0
Query:  254 SQEDQAELLEAA-GLDPEALAALPPEMRREVLEQEARNRRMRE-AQSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            S +  AE L+AA GLDPEALAALPP+MRRE++ QE         + S PPADPSRA +MDNASF+A          LL+AD++ L ++P S+VAEA ++RER
Sbjct:  165 STDAVAEELDAASGLDPEALAALPPDMRREIIAQEQXXXXXXXXSASEPPADPSRAEEMDNASFLASLSAELREEVLLTADESFLASMPSSIVAEANLLRER 266          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: I2CQM8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM8_NANGC)

HSP 1 Score: 81.6 bits (200), Expect = 5.410e-15
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  262 LEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSV-PPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            L  + LDPEAL+ALP  +R EVL +EAR RR REA +   PA+P+ A +MDNASF+A          LL   D +L +LPP++VAEA V+RER
Sbjct:   28 LPGSSLDPEALSALPEALRNEVLAEEARERRQREATAARAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRER 120          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC)

HSP 1 Score: 87.0 bits (214), Expect = 7.790e-15
Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 0
Query:  262 LEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            L+ + LDPE LAALP +MRREV+EQE    R+   Q  PPADP+RA DMD ASF+A          L+SAD+  L +LPPS+ AEA ++RER
Sbjct: 3198 LDGSTLDPEVLAALPEDMRREVIEQE----RLARGQQDPPADPARAEDMDTASFLASVGPDLREEILVSADNDFLASLPPSIAAEAQILRER 3285          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A7S2FSG9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FSG9_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.900e-14
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 0
Query:  257 DQAELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            D A    ++GLDPEALAALP ++RREVL Q A            PADPSRA DMDNASF+A          LL AD A L+TLPP+LVAEA ++ ER
Sbjct:  264 DFAAEAASSGLDPEALAALPEDVRREVLAQHAAMSTSDGIGRHEPADPSRAEDMDNASFLASLAPELRADILLQADGAFLQTLPPNLVAEAQLLHER 360          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: W7TP10_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP10_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.960e-13
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  262 LEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSV-PPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            L  + LDPEAL+ALP  +R EVL +EAR RR REA +   PA+P+ A +MDNASF+A          LL   D +L +LPP++VAEA V+RER
Sbjct:   28 LPGSSLDPEALSALPEALRNEVLAEEARERRRREATATRAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRER 120          
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Match: A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.650e-12
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:  254 SQEDQAELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSVPPADPSRAADMDNASFVAXXXXXXXXXXLLSADDALLETLPPSLVAEAMVMRER 353
            ++E  A+L   +GLDP  LA LP +MRR+ + Q+ R R    A++  PADPS AA+MDNASF+           LL+AD+  L +LPP++ AEA ++RER
Sbjct: 1793 TEELTAQLDPTSGLDPSVLAELPEDMRRDAIAQDRRERE-EAARAAQPADPSNAAEMDNASFLVSLAPELREEILLTADENFLNSLPPNIRAEAQLLRER 1891          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56108.13051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3W3_ECTSI3.090e-4346.59HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8R1_9PHAE1.840e-1961.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4D520_HETAK9.120e-1856.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4HZ14_9STRA1.280e-1756.84Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2QUU6_9STRA5.080e-1552.94Hypothetical protein n=2 Tax=Triparma pacifica Tax... [more]
I2CQM8_NANGC5.410e-1551.61E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
B7G082_PHATC7.790e-1553.26HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A7S2FSG9_9STRA1.900e-1453.61Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W7TP10_9STRA3.960e-1351.61Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A7S1VJ82_9STRA4.650e-1245.00Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025527HUWE1/Rev1, ubiquitin binding regionPFAMPF14377UBMcoord: 266..292
e-value: 1.3E-6
score: 27.6
coord: 305..336
e-value: 7.7E-9
score: 34.7
NoneNo IPR availablePANTHERPTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEcoord: 16..355
NoneNo IPR availablePANTHERPTHR11254:SF291E3 UBIQUITIN-PROTEIN LIGASE HUWE1coord: 16..355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56108contigH-elongata_contig56108:485..3707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56108.13051.1mRNA_H-elongata_contig56108.13051.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56108 485..3707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56108.13051.1 ID=prot_H-elongata_contig56108.13051.1|Name=mRNA_H-elongata_contig56108.13051.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp
GAAAAGTGGSVAPIANQGRWTDSGQPLTAAEGRTVLPMLEHVEEAIVTRL
LPSQATLESTQAQAALQHLAGDGASAGAEAKEEKEEQVGDADGAGASSLE
ASAARDNVTAMVERSMESAPAADGGDGGPGQESGDSGPTALGMAVVGTSE
ATVAPAIVNPTAMAVEDSASASEGEAVAVLASSLSLSPSREAAEAVTAAG
LAPALVAEPPPAVASARSEEKGDQDPGTTAEEEEEAPASGAPFSIVLIFR
FFFSQEDQAELLEAAGLDPEALAALPPEMRREVLEQEARNRRMREAQSVP
PADPSRAADMDNASFVATLPPELRREVLLSADDALLETLPPSLVAEAMVM
RERMPLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025527HUWE1/Rev1_UBM