prot_H-elongata_contig56094.13046.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56094.13046.1
Unique Nameprot_H-elongata_contig56094.13046.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
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BLAST of mRNA_H-elongata_contig56094.13046.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.090e-26
Identity = 47/73 (64.38%), Postives = 61/73 (83.56%), Query Frame = 0 
Query:    1 MVRQYLVEVYKATVLSFSHRLQSAVAGAGGPALHANFDLWTSKTSNEKYLGIRLFWCTTKFVLDPALIAIKLF 73
            M++ ++VE+Y ATV  FS+ ++ A+ GAGG  LHANFDLWTSK SNEKY+G+RLFWCT+ FVLD AL+A+KLF
Sbjct:  214 MIKHFVVELYDATVSKFSYSIRKAITGAGGAVLHANFDLWTSKWSNEKYIGLRLFWCTSTFVLDSALVAVKLF 286
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BLAST of mRNA_H-elongata_contig56094.13046.1 vs. uniprot
Match: A0A6H5L6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.540e-8
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:    2 VRQYLVEVYKATVLSFSHRLQSAVAGAGGPALHANFDLWTSKTSNEKYLGIRLFWCTTKFVLDPALIAIKLF 73
            +++ +VE+Y AT  +F+  L   V  A  P L+ N DLWTS+ S EKY+G+R+ +     V+   ++ +KLF
Sbjct:  256 IKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLF 327
[Close]
BLAST of mRNA_H-elongata_contig56094.13046.1 vs. uniprot
Match: A0A6H5KX27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX27_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.540e-8
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:    2 VRQYLVEVYKATVLSFSHRLQSAVAGAGGPALHANFDLWTSKTSNEKYLGIRLFWCTTKFVLDPALIAIKLF 73
            +++ +VE+Y AT  +F+  L   V  A  P L+ N DLWTS+ S EKY+G+R+ +     V+   ++ +KLF
Sbjct:  177 IKKMIVEMYAATTRAFNSELVKDVRRALIPILYLNCDLWTSRVSGEKYIGVRVCYMNENMVIKSFMLGVKLF 248
[Close]
BLAST of mRNA_H-elongata_contig56094.13046.1 vs. uniprot
Match: A0A0N7L827_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L827_PLAHL)

HSP 1 Score: 57.4 bits (137), Expect = 7.330e-8
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    6 LVEVYKATVLSFSHRLQSAVAGAGGPALHANFDLWTSKTSNEKYLGIRLFWCTTKFVLDPALIAIKLF 73
            + +VY AT   F   L+   A    P  H N DLWTSKTS +KY+GIR+ +   ++ +D +++AIK F
Sbjct:   94 IFKVYHATKEGFRTDLRKIKASCPLPIFHLNVDLWTSKTSKDKYVGIRIIFVDAQWRMDISILAIKRF 161
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56094.13046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE2.090e-2664.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L6Z1_9PHAE1.540e-837.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KX27_9PHAE1.540e-837.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0N7L827_PLAHL7.330e-841.18Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56094contigH-elongata_contig56094:2..666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56094.13046.1mRNA_H-elongata_contig56094.13046.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56094 2..733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56094.13046.1 ID=prot_H-elongata_contig56094.13046.1|Name=mRNA_H-elongata_contig56094.13046.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MVRQYLVEVYKATVLSFSHRLQSAVAGAGGPALHANFDLWTSKTSNEKYL
GIRLFWCTTKFVLDPALIAIKLF*
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