prot_H-elongata_contig56066.13042.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56066.13042.1
Unique Nameprot_H-elongata_contig56066.13042.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A183WH30_TRIRE (Complex1_51K domain-containing protein n=2 Tax=Protostomia TaxID=33317 RepID=A0A183WH30_TRIRE)

HSP 1 Score: 99.8 bits (247), Expect = 2.760e-26
Identity = 43/53 (81.13%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPA++G+FGCP+TVTNVETVAV+PTI RRGG WFASFGR+
Sbjct:   20 LEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVSPTICRRGGDWFASFGRE 72          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A7S3K1X1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X1_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.280e-26
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGG WFASFGR+
Sbjct:  213 LEGKQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGSWFASFGRE 265          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: D7FZX3_ECTSI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX3_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 7.170e-26
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+GRQGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRG  WFASFGRK
Sbjct:  235 LEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFASFGRK 287          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A7S1TYU1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYU1_9STRA)

HSP 1 Score: 106 bits (265), Expect = 8.400e-26
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+GRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRG  WFA FGRK
Sbjct:  210 LEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGSSWFAGFGRK 262          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A835ZC73_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC73_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.500e-26
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+GRQGKPR+KPPFPANVGVFGCP+TVTNVET+AVAPTILRRGG WFA FGRK
Sbjct:  227 LEGRQGKPRMKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGGAWFAGFGRK 279          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A498HNG0_MALDO (Complex1_51K domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498HNG0_MALDO)

HSP 1 Score: 99.4 bits (246), Expect = 1.470e-25
Identity = 43/53 (81.13%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPAN G++GCP+TVTNVETVAV+PTI+RRG  WFASFGRK
Sbjct:   61 LEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTIIRRGAEWFASFGRK 113          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A0K0DQ33_ANGCA (SLBB domain-containing protein n=1 Tax=Angiostrongylus cantonensis TaxID=6313 RepID=A0A0K0DQ33_ANGCA)

HSP 1 Score: 100 bits (249), Expect = 1.840e-25
Identity = 44/53 (83.02%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPA++G+FGCP+TVTNVETVAVAPTI RRGG WFASFGR+
Sbjct:    9 LEGKQGKPRLKPPFPADIGLFGCPTTVTNVETVAVAPTICRRGGEWFASFGRE 61          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A7S2B9D4_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9D4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.410e-25
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPANVGVFGCPSTVTNVET+AVAPTI RRG  WFASFGRK
Sbjct:  231 LEGKQGKPRLKPPFPANVGVFGCPSTVTNVETIAVAPTIFRRGANWFASFGRK 283          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A7S2R3Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3Q9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.270e-25
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            L+G+QGKPRLKPPFPANVGVFGCP+TVTNVET+AVAPTI RRG  WFASFGRK
Sbjct:  247 LEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTIFRRGASWFASFGRK 299          
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Match: A0A2P6NP92_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NP92_9EUKA)

HSP 1 Score: 104 bits (260), Expect = 6.620e-25
Identity = 46/53 (86.79%), Postives = 51/53 (96.23%), Query Frame = 0
Query:    1 LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASFGRK 53
            ++G+QGKPRLKPPFPANVG+FGCP+TVTNVETVAVAPTILRRGG WFA FGRK
Sbjct: 1171 IEGKQGKPRLKPPFPANVGLFGCPTTVTNVETVAVAPTILRRGGSWFAGFGRK 1223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56066.13042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A183WH30_TRIRE2.760e-2681.13Complex1_51K domain-containing protein n=2 Tax=Pro... [more]
A0A7S3K1X1_9STRA3.280e-2692.45NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
D7FZX3_ECTSI7.170e-2692.45NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S1TYU1_9STRA8.400e-2692.45NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A835ZC73_9STRA9.500e-2688.68NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A498HNG0_MALDO1.470e-2581.13Complex1_51K domain-containing protein n=1 Tax=Mal... [more]
A0A0K0DQ33_ANGCA1.840e-2583.02SLBB domain-containing protein n=1 Tax=Angiostrong... [more]
A0A7S2B9D4_9STRA3.410e-2588.68NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S2R3Q9_9STRA5.270e-2586.79Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A2P6NP92_9EUKA6.620e-2586.79Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyGENE3D3.40.50.11540coord: 1..49
e-value: 5.4E-17
score: 63.9
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilySUPERFAMILY142019Nqo1 FMN-binding domain-likecoord: 1..52
IPR011537NADH ubiquinone oxidoreductase, F subunitPANTHERPTHR11780NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1coord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56066contigH-elongata_contig56066:3520..3678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56066.13042.1mRNA_H-elongata_contig56066.13042.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56066 3520..3678 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56066.13042.1 ID=prot_H-elongata_contig56066.13042.1|Name=mRNA_H-elongata_contig56066.13042.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
LQGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGGWFASF
GRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037225Nuo51_FMN-bd_sf
IPR011537NADH-UbQ_OxRdtase_suF