prot_H-elongata_contig56022.13036.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig56022.13036.1
Unique Name	prot_H-elongata_contig56022.13036.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

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BLAST of mRNA_H-elongata_contig56022.13036.1 vs. uniprot
Match: D7FVA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA8_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 3.530e-9
Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 0

Query:    1 LALAREAQRQLERTVRDKEALQXXXXXXXXXXEAALLVAALAEEEKTKLEARIARLSSELKLQAAPLMALQLEIDQARKGSLIMRDRLKEERKNNFLR 98
            L  +R+ + QLER +++ EAL+                  +AE+EK  LE R+A LS E+KLQ APL ALQLE+ Q R  +  MR RLKEER+ + LR
Sbjct:  200 LRASRDVRGQLERALQEAEALRADNIAFKTRVN-------VAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQRLKEERRESRLR 290

[Close]

BLAST of mRNA_H-elongata_contig56022.13036.1 vs. uniprot
Match: A0A6H5L8F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F2_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 8.870e-9
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0

Query:    1 LALAREAQRQLERTVRDKEALQXXXXXXXXXXEAALLVAALAEEEKTKLEARIARLSSELKLQAAPLMALQLEIDQARKGSLIMRDRLKEERKNNFLR 98
            L  +R+ + QLER +++ EAL+                  LAE+EK  LE R+A LS E+KLQ APL ALQLE+ Q R  +  MR  LKEER+ + LR
Sbjct:   98 LRASRDVRGQLERALQEAEALRADNIAFKTRVN-------LAEKEKAHLETRVALLSDEVKLQIAPLKALQLELTQTRSDTETMRQXLKEERRESRLR 188

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig56022.13036.1 vs. uniprot

BLAST of mRNA_H-elongata_contig56022.13036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FVA8_ECTSI	3.530e-9	43.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L8F2_9PHAE	8.870e-9	43.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..24
None	No IPR available	COILS	Coil	Coil	coord: 32..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig56022	contig	H-elongata_contig56022:1428..2330 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig56022.13036.1	mRNA_H-elongata_contig56022.13036.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig56022 461..2330 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig56022.13036.1 ID=prot_H-elongata_contig56022.13036.1|Name=mRNA_H-elongata_contig56022.13036.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
LALAREAQRQLERTVRDKEALQRDKYAYQRDKEAALLVAALAEEEKTKLE
ARIARLSSELKLQAAPLMALQLEIDQARKGSLIMRDRLKEERKNNFLRQI
*