prot_H-elongata_contig56008.13032.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56008.13032.1
Unique Nameprot_H-elongata_contig56008.13032.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: D7FTE1_ECTSI (Tocopherol phytyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE1_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 8.400e-41
Identity = 77/114 (67.54%), Postives = 89/114 (78.07%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDV GDR FNI SFSVV+GE  LF FAR LLTALLW T+  L  G++AAA+ASLP  +  RG ++  AL++GQLVR+RA GVDPKQP QVY FYM LWK+FY SY FLPLAR
Sbjct:  265 DVPDVEGDRMFNIPSFSVVLGETKLFAFARRLLTALLWSTAGVLGVGAKAAASASLPLTSGLRGLMSAVALIAGQLVRRRAAGVDPKQPKQVYDFYMDLWKLFYLSYLFLPLAR 378          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A6H5JCM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.520e-39
Identity = 78/114 (68.42%), Postives = 90/114 (78.95%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDVAGDR FNI SFSVV+GE  LF FAR LLTALLW T+ AL  G++AAA+ASLP   +  G V+  AL++GQL+R+RA GVDP+QP QVY FYM LWKIFY SY FLPLAR
Sbjct:  376 DVPDVAGDRMFNIPSFSVVLGEIKLFAFARRLLTALLWSTAAALGVGAKAAASASLP---LTSGLVSALALITGQLMRRRAAGVDPEQPKQVYDFYMDLWKIFYLSYLFLPLAR 486          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: B7G488_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G488_PHATC)

HSP 1 Score: 100 bits (250), Expect = 7.430e-23
Identity = 54/114 (47.37%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDVAGDR  N+R+FSV +G+  +F+ +R LL+ L W   V      +AA  A    +A +R   A +A + G  VRK A GVDP+   QVY++YM LWK+FY SY  LP AR
Sbjct:  294 DVPDVAGDRNSNVRTFSVRLGQGRIFQASRRLLSGLFWTVGVGF---GKAAFQAPTAGLAASRSLTAVAAFLGGCSVRKDAQGVDPENAGQVYSYYMHLWKLFYLSYLVLPFAR 404          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A7S0ULR7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULR7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.520e-21
Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPD+ GD   NIR+ SV +G   +++    LLT L WG  VA   G+     A++  + + R  V  SAL++G  V+K A  VDP+ P +VY +YM LWK+FY SYF LPLAR
Sbjct:  166 DVPDIKGDELSNIRTVSVRLGAKTVYKMMHRLLTGLFWGAGVAFFRGAIVNNKATMT-VRLGRAVVGISALLAGASVQKEAAPVDPENPKEVYDYYMHLWKLFYLSYFVLPLAR 278          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A1E7F9X4_9STRA (Homogentisate phytyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9X4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.110e-20
Identity = 54/118 (45.76%), Postives = 71/118 (60.17%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAG----SRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDV GD   NIR+ +V +G  ++FR    LLT L WG  +A        S  + ++S   + + R  V  SALV+G  V+K A  VDP  P++VY FYM LWK+FY SYF LP+AR
Sbjct:  364 DVPDVKGDNLSNIRTVAVRLGPNSVFRGMHRLLTTLFWGVGIAFFRAAVITSSTSTSSSTMMVRLGRIIVGISALVAGASVQKEAAPVDPDNPTEVYGFYMHLWKLFYLSYFVLPIAR 481          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A0M0JD15_9EUKA (Homogentisate phytyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JD15_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 2.380e-19
Identity = 57/114 (50.00%), Postives = 68/114 (59.65%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPD+ GDRQF IRSFSV +G AA+ R   +LLT  L  T VAL A +  A  A+L   AV R  V+ +   S   +R+RA  V P  P  VYA YM LWK FY +Y  LP AR
Sbjct:  285 DVPDIKGDRQFGIRSFSVRIGAAAVLRLGLNLLTTTLALTGVALGAAATLAPTAAL---AVRRLAVSLACAASVVAIRRRAASVSPDDPPAVYALYMELWKYFYGAYLCLPFAR 395          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A7S0CPH4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CPH4_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 5.640e-19
Identity = 53/114 (46.49%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDV GDRQF I+SFSV +G+  +  FA+ LLTA     + AL A +  A   +    A+A G+   S  V       R  GVD +  S+ YA+YM LWK+FY SYF LPLAR
Sbjct:   75 DVPDVKGDRQFGIKSFSVRLGQDKVLAFAQWLLTASHLAAATALGAAAWEAQTMTRLLAAIATGYAGVSLAV-------RRRGVDARNESEAYAYYMHLWKMFYLSYFALPLAR 181          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A7S0KBA4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBA4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.040e-18
Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDV GD + NIRSFSV +G+  +F+ AR  L+ LL+G         R+A+  S   +  +R  V  S++  G   R+ +  V+P+  S+VY +YM+LWKIFY SYF LP AR
Sbjct:  135 DVPDVEGDEKANIRSFSVRVGQKKIFKGARRTLSLLLFGYGAGFLNAGRSASTFS---VLASRMIVGLSSIYFGVKARENSRDVNPESSSEVYDYYMYLWKIFYLSYFSLPFAR 245          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A7R9W9M6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9M6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.130e-18
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGS-RAAAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDV GD + NIRSFSV +G+  +F+  R LL  L +    A  AG  R+A AA+ P +   R  V  ++   G  VR+ A  VDP+   QVY +YM LWK+FY SY  LP AR
Sbjct:  283 DVPDVGGDEEHNIRSFSVRVGQKGVFKSMRRLLMGLFF----AFGAGFLRSATAATAPALRACRAGVGLASFALGLSVREEAQPVDPEDSQQVYEYYMHLWKLFYLSYLVLPFAR 393          
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Match: A0A7S0LDE0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LDE0_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 3.050e-16
Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 0
Query:    1 DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRAAAAASLPWIAVAR-GFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLWKIFYASYFFLPLAR 114
            DVPDVAGDR++ +RS SV +G+  + + A  LL   L G + ALA  +  A  A+  W+A AR   VA     +   V +++  V      +VYA+YM+LWKIFYASY  LP AR
Sbjct:  296 DVPDVAGDRKYGVRSLSVRVGQERVLQLAVRLLALTLSGAAAALAVAATFACQANA-WLACARRSAVALLGFAAAACVMRKSQAVSATDGKEVYAYYMWLWKIFYASYICLPFAR 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56008.13032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTE1_ECTSI8.400e-4167.54Tocopherol phytyltransferase n=1 Tax=Ectocarpus si... [more]
A0A6H5JCM7_9PHAE1.520e-3968.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7G488_PHATC7.430e-2347.37Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0ULR7_9STRA1.520e-2145.61Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7F9X4_9STRA1.110e-2045.76Homogentisate phytyltransferase n=1 Tax=Fragilario... [more]
A0A0M0JD15_9EUKA2.380e-1950.00Homogentisate phytyltransferase n=1 Tax=Chrysochro... [more]
A0A7S0CPH4_9EUKA5.640e-1946.49Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S0KBA4_9STRA1.040e-1843.86Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7R9W9M6_9STRA3.130e-1846.09Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0LDE0_9EUKA3.050e-1643.48Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43009FAMILY NOT NAMEDcoord: 1..113
NoneNo IPR availablePANTHERPTHR43009:SF6HOMOGENTISATE PHYTYLTRANSFERASE 1, CHLOROPLASTICcoord: 1..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..114
NoneNo IPR availableTMHMMTMhelixcoord: 92..111
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56008contigH-elongata_contig56008:336..1929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56008.13032.1mRNA_H-elongata_contig56008.13032.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56008 336..1929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56008.13032.1 ID=prot_H-elongata_contig56008.13032.1|Name=mRNA_H-elongata_contig56008.13032.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
DVPDVAGDRQFNIRSFSVVMGEAALFRFARSLLTALLWGTSVALAAGSRA
AAAASLPWIAVARGFVATSALVSGQLVRKRADGVDPKQPSQVYAFYMFLW
KIFYASYFFLPLAR*
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