prot_H-elongata_contig56000.13031.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig56000.13031.1
Unique Nameprot_H-elongata_contig56000.13031.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
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BLAST of mRNA_H-elongata_contig56000.13031.1 vs. uniprot
Match: D7FLC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC4_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 7.910e-76
Identity = 130/159 (81.76%), Postives = 140/159 (88.05%), Query Frame = 0 
Query:    1 QVVRREHYLTFMEWFVYTLPHVALPVKVWRMYRALKDDDVPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRAQAAVMSYRIKISFIDIRVVMLRIENLLLRGDSHGHGHGSVEHNQGRMLEETNLVQGPRAMENG 159
            +VVRREHYL FMEWFVYTLP VALPVK+WRMYRAL+DD++PFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGR QA VMSYRIKIS ID+R VMLRIENLLLRGD         +  QGR+LEET+LVQGP  +ENG
Sbjct:  368 RVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALRDDNIPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRGDE--------QVAQGRVLEETSLVQGP--VENG 516
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BLAST of mRNA_H-elongata_contig56000.13031.1 vs. uniprot
Match: A0A6H5J9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z1_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 6.710e-75
Identity = 130/159 (81.76%), Postives = 140/159 (88.05%), Query Frame = 0 
Query:    1 QVVRREHYLTFMEWFVYTLPHVALPVKVWRMYRALKDDDVPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRAQAAVMSYRIKISFIDIRVVMLRIENLLLRGDSHGHGHGSVEHNQGRMLEETNLVQGPRAMENG 159
            +VVRREHYL FMEWFVYTLP VALPVK+WRMYRAL+DD++PFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGR QA VMSYRIKIS ID+R VMLRIENLLLRGD         +  QGR+LEET+LVQGP  +ENG
Sbjct:  709 RVVRREHYLAFMEWFVYTLPQVALPVKIWRMYRALRDDNIPFVSFPLSQDKSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRPQATVMSYRIKISAIDVRGVMLRIENLLLRGDE--------QVAQGRVLEETSLVQGP--VENG 857
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig56000.13031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLC4_ECTSI7.910e-7681.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9Z1_9PHAE6.710e-7581.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig56000contigH-elongata_contig56000:223..3019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig56000.13031.1mRNA_H-elongata_contig56000.13031.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig56000 223..3019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig56000.13031.1 ID=prot_H-elongata_contig56000.13031.1|Name=mRNA_H-elongata_contig56000.13031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
QVVRREHYLTFMEWFVYTLPHVALPVKVWRMYRALKDDDVPFVSFPLSQD
KSAFYSHRQAMSGPAIPGRFSFRFSRQPSCITVDYTVQARAVEGRAQAAV
MSYRIKISFIDIRVVMLRIENLLLRGDSHGHGHGSVEHNQGRMLEETNLV
QGPRAMENGAAAAAAAAAAAAAAAAATGGGAPTGTGAGPGGHPGAANGVH
HETGLG
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