prot_H-elongata_contig55947.13023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55947.13023.1
Unique Name	prot_H-elongata_contig55947.13023.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	91

Homology

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: D8LTJ5_ECTSI (HDc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ5_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 4.980e-36
Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYFQRDARNSVG+R +++DRFIELAR V P    A+D+ G   RM CYPDKLWTEALGLFR+RMELH  VYQH GGKSVELM
Sbjct:  269 SGLDVDKLDYFQRDARNSVGDRPMDLDRFIELAR-VLP----AEDQRGNRRRMICYPDKLWTEALGLFRSRMELHTLVYQHHGGKSVELM 353

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: H3GU84_PHYRM (HDc domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU84_PHYRM)

HSP 1 Score: 78.6 bits (192), Expect = 4.990e-15
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + E H + C+P+KL  + +  FRTR ELHQ VYQH+G ++++ M
Sbjct:  309 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDPEEHMVVCFPEKLAGQIMQAFRTRYELHQSVYQHRGVRAIDYM 392

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: K3X7T5_GLOUD (HD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7T5_GLOUD)

HSP 1 Score: 76.3 bits (186), Expect = 1.260e-14
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RDA ++  +   ++D  I  AR +       DD++G++    C+P+KL  + +  F TR +LHQ VYQHK  +++E M
Sbjct:  130 SGLDVDKLDYFMRDALHTGAKASCDVDLLIRNARVLVDR----DDKHGKM--AICFPEKLSGQVMQAFHTRFDLHQSVYQHKAIRAIEYM 213

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: A0A6A4ALH8_9STRA (HD domain-containing protein (Fragment) n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4ALH8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.720e-14
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + + + + C+P+KL  + +  FRTR ELHQ VYQHKG ++++ M
Sbjct:  129 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDPDENMVVCFPEKLPGQIMQAFRTRYELHQSVYQHKGVRAIDYM 212

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: A0A6A4AUB3_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AUB3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.280e-14
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + + + + C+P+KL  + +  FRTR ELHQ VYQHKG ++++ M
Sbjct:   62 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDPDENMVVCFPEKLPGQIMQAFRTRYELHQSVYQHKGVRAIDYM 145

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: A0A329SE61_9STRA (HD domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SE61_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.370e-14
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + E + + C+P+KL  + +  FRTR ELHQ VYQH+G ++++ M
Sbjct:  308 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDSEENMVVCFPEKLAGQIMQAFRTRYELHQSVYQHRGVRAIDYM 391

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: G5AFW9_PHYSP (HDc domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AFW9_PHYSP)

HSP 1 Score: 76.6 bits (187), Expect = 2.370e-14
Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + E + + C+P+KL  + +  FRTR ELHQ VYQHKG ++++ M
Sbjct:  309 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDPEENMVVCFPEKLPGQIMQAFRTRYELHQSVYQHKGVRAIDYM 392

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: M4BQJ5_HYAAE (HDc domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQJ5_HYAAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.140e-14
Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + + + + C+P+KL  + +  FRTR ELHQ VYQH+G ++++ M
Sbjct:  285 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDQEDPDKNMVICFPEKLAGQVMQAFRTRYELHQSVYQHRGVRAIDYM 368

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: A0A6A3GEJ4_9STRA (HD domain-containing protein (Fragment) n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3GEJ4_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.140e-14
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RD+ ++  +   + D  I  AR +       D  + + + + C+P+KL  + +  FRTR ELHQ VYQHKG ++++ M
Sbjct:  130 SGLDVDKLDYFMRDSLHTGAKMSCDTDLLIRNARVL------VDREDPDENMVVCFPEKLPGQIMQAFRTRYELHQSVYQHKGVRAIDYM 213

[Close]

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Match: A0A8K1C7A9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7A9_PYTOL)

HSP 1 Score: 75.9 bits (185), Expect = 4.420e-14
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    1 SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEVHRM-FCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM 90
            SGLDVDKLDYF RDAR++  +   +++  I+       N R+  DR+    ++  C+P+KL  + +  FRTR ELHQ VYQHK  ++ E M
Sbjct:  306 SGLDVDKLDYFLRDARHTGAKASCDVELIIQ-------NARVLVDRDDPERKLSICFPEKLAGKIMQAFRTRFELHQAVYQHKNIRAAEYM 389

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55947.13023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTJ5_ECTSI	4.980e-36	75.56	HDc domain-containing protein n=2 Tax=Ectocarpus T...	[more]
H3GU84_PHYRM	4.990e-15	42.22	HDc domain-containing protein n=1 Tax=Phytophthora...	[more]
K3X7T5_GLOUD	1.260e-14	42.22	HD domain-containing protein n=1 Tax=Globisporangi...	[more]
A0A6A4ALH8_9STRA	1.720e-14	41.11	HD domain-containing protein (Fragment) n=1 Tax=Ph...	[more]
A0A6A4AUB3_9STRA	2.280e-14	41.11	Uncharacterized protein (Fragment) n=3 Tax=Phytoph...	[more]
A0A329SE61_9STRA	2.370e-14	41.11	HD domain-containing protein n=1 Tax=Phytophthora ...	[more]
G5AFW9_PHYSP	2.370e-14	42.22	HDc domain-containing protein n=1 Tax=Phytophthora...	[more]
M4BQJ5_HYAAE	3.140e-14	40.00	HDc domain-containing protein n=1 Tax=Hyaloperonos...	[more]
A0A6A3GEJ4_9STRA	4.140e-14	41.11	HD domain-containing protein (Fragment) n=3 Tax=Ph...	[more]
A0A8K1C7A9_PYTOL	4.420e-14	42.86	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.3210.10		coord: 1..90 e-value: 4.8E-17 score: 64.3
None	No IPR available	PANTHER	PTHR11373:SF4	DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1	coord: 2..90
None	No IPR available	PANTHER	PTHR11373	SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN-RELATED	coord: 2..90
None	No IPR available	SUPERFAMILY	109604	HD-domain/PDEase-like	coord: 3..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55947	contig	H-elongata_contig55947:1981..3217 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55947.13023.1	mRNA_H-elongata_contig55947.13023.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55947 1981..3217 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55947.13023.1 ID=prot_H-elongata_contig55947.13023.1|Name=mRNA_H-elongata_contig55947.13023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
SGLDVDKLDYFQRDARNSVGERGLNIDRFIELARHVQPNMRMADDRNGEV
HRMFCYPDKLWTEALGLFRTRMELHQHVYQHKGGKSVELM*