prot_H-elongata_contig55927.13021.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55927.13021.1
Unique Nameprot_H-elongata_contig55927.13021.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length179
Homology
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: D8LI84_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI84_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.190e-77
Identity = 122/178 (68.54%), Postives = 147/178 (82.58%), Query Frame = 0
Query:    1 GRGTVVPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPMFTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAPIHPLDMEDVRVLEQKQIRAGHASILRVQVSMSGYAFPGKYAP 178
            G   VVP LR+ITA++R LYHR  LKFD IV+SLIY+ERLMKET+GA+RP P+NWKSL++S L+LSSKVWDD+SMWNRDFSE+ P F+L RLNQLEVAVL +LRFNVKVLSSEYAKYYFHLR+MCVRGGLS  HAPIHPLDME ++ LE   + + + + L  +V+ SGYAF  K+ P
Sbjct:  414 GEAVVVPPLRDITAFYRDLYHRTCLKFDSIVLSLIYMERLMKETKGAIRPQPWNWKSLIISALVLSSKVWDDNSMWNRDFSEVFPSFSLGRLNQLEVAVLGVLRFNVKVLSSEYAKYYFHLRAMCVRGGLSDSHAPIHPLDMEGIKELEAMSLHSANDAKLLRKVAKSGYAFTDKHGP 591          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A1E7FAH8_9STRA (Cyclin N-terminal domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAH8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 6.580e-49
Identity = 83/149 (55.70%), Postives = 112/149 (75.17%), Query Frame = 0
Query:    6 VPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM---FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDH-APIHPLDMEDVRVLEQ 150
            +PSL E+  +FR ++ +A+++ DCI++SLIYVERL+K T G LRP   NW+SL+ ST++LSSKVWDD SMWN DFS+ CP    F+L R NQLE+AVL  L F VKV +SEYAKYYF LRSM ++ GL+ ++   ++PLD+E  R L+Q
Sbjct:   78 IPSLDEVATFFRDVFFKAQMEADCIILSLIYVERLIKVTHGCLRPKTCNWRSLLFSTMILSSKVWDDLSMWNGDFSQSCPSGVNFSLQRTNQLELAVLNTLHFKVKVPASEYAKYYFLLRSMLIKSGLAGENLGSLNPLDVEGARRLQQ 226          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.980e-48
Identity = 75/144 (52.08%), Postives = 116/144 (80.56%), Query Frame = 0
Query:    6 VPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPMFTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAPIHPLDMEDVRVLE 149
            VPSL+E+  +FR +Y +++++ +CI++SLIY+ER+ K T+G+++  P NWKSL++ST++++SKVWDD SMWN DFS++CP FTL R+N+LE+A+L++L + VKV +S+YAKYYFH+RS CVR GL+ D   + PLD+   + L+
Sbjct:  252 VPSLQELVTFFREIYVKSQMEIECIIMSLIYLERVTKVTKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAKYYFHIRSYCVRLGLTHDLDSLAPLDLTGAKKLQ 395          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7R9ZM94_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM94_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.920e-47
Identity = 82/167 (49.10%), Postives = 118/167 (70.66%), Query Frame = 0
Query:    6 VPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCP---MFTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDH-APIHPLDMEDVRVLEQKQIRAGHASILRVQVSMS 168
            +PSL E+  ++R ++ +A+++ DCI++SLIYVERL+K TRG LRP   NW+S++ S ++LSSKVWDD SMWN DFS+ CP    F L R+N+LE+A+L +L F VKV +SEYAKYYF LRSM ++ GL  D    ++PLD+     L+Q   +    S+ +V+V+ S
Sbjct:   35 IPSLEEVGKFYRDIFVKAQMESDCIIMSLIYVERLIKTTRGTLRPRASNWRSMLFSCMVLSSKVWDDLSMWNADFSQSCPPGVSFPLQRINELELAILNVLEFQVKVPASEYAKYYFLLRSMLIKSGLGGDQITTLNPLDVVGALRLQQVSSQYEADSLAKVRVTRS 201          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S4AWA7_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWA7_9STRA)

HSP 1 Score: 167 bits (422), Expect = 5.240e-47
Identity = 85/158 (53.80%), Postives = 114/158 (72.15%), Query Frame = 0
Query:    2 RGTVVPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM----FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLS-MDHAPIHPLDMEDVRVLEQKQIR 154
            R T +PSL E+  ++R  + +A+++ DCI++SLIYVERL+K+T G LRP   NW+SL+ S ++LSSKVWDD SMWN DFS+ CP     F+L R+NQLE+AVL  L+F+VKV +SEYAKYYF LRSM ++ GL   D   + PLD+E  R L+Q   R
Sbjct:  190 RKTYIPSLDEVATFYRDTFFKAQMEADCIIMSLIYVERLIKQTIGRLRPRASNWRSLIFSCMILSSKVWDDLSMWNGDFSQSCPPGGVNFSLQRINQLELAVLNSLKFSVKVPASEYAKYYFLLRSMLIKSGLGGEDLGSLDPLDVEGARRLQQVSSR 347          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S2I4W4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I4W4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.910e-47
Identity = 81/147 (55.10%), Postives = 114/147 (77.55%), Query Frame = 0
Query:    6 VPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM---FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAPIHPLDMEDVRVLE 149
            VPSL +IT ++R ++ R++++ DCI++SLIYVERL+K+T G +RP P NW+S++ S +++SSKVWDD SMWN DFS+ CP    F+L R+N+LE+AVL  L++NVKV +SEYAKYYF LRSM +R GL+ +     PL+ME V+ LE
Sbjct:  341 VPSLDDITNFYRDVFRRSQMEADCIIMSLIYVERLIKDTNGGVRPKPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRDVSFSLQRINELELAVLGCLKYNVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNMEGVKKLE 487          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.900e-46
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 0
Query:    7 PSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM---FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLS-MDHAPIHPLDMEDVRVLEQKQIRAGHASILR 162
            PSL +IT ++R ++ RA+++ DC+++SLIYVERL+K TRG LRP   NW+S++ S ++L+SKVWDD SMWN DFS+ CP    FTL R+N+LE+AVL+ L + VKV +SEYAKYYF LRSM ++ GL   D   ++PLD++  R L+    +   A+ LR
Sbjct:   62 PSLDDITTFYRDVFGRAQMESDCVIMSLIYVERLIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAKYYFLLRSMLIKSGLGGEDLNEMNPLDVDGARRLQAVSTKYQRAASLR 221          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S1BXU3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXU3_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.170e-45
Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
Query:    6 VPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPMFTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDH-APIHPLDMEDVRVLEQKQIRAGHASILRVQVSMS 168
            VPSL  +T ++R ++ +++++ DCI++SLIY+ERL+KET+G +RP   NWKS++ S+++++SKVWDD SMWN DFS+L P FTL R+N LE+A+L  L++ VKV +SEYAKYYF LRSM  R GL  D      PLD++ V+  E    R G  +  +++ + S
Sbjct:  510 VPSLEVLTKFYRDVFQKSQMESDCIIISLIYIERLVKETQGVVRPRCSNWKSIIFSSMIMASKVWDDLSMWNADFSQLSPSFTLQRINDLEIAILNALKYCVKVPASEYAKYYFLLRSMLARSGLGSDDLTSASPLDVDSVKKFETMSSRYGKNAAKKIRRAAS 673          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: A0A7S2EB28_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EB28_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.390e-45
Identity = 83/166 (50.00%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    4 TVVPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM---FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAPIHPLDMEDVRVLEQKQIRAGHASILRVQVS 166
            + VPSL +IT ++R ++ R++++ DCIV+SLIY+ERL+K+T G +RP P NW+S++ S +++SSKVWDD SMWN DFS+ CP    F+L R+N+LE+AVL  LR++VKV +SEYAKYYF LRSM +R GL+ +     PL+ E V+ LE         +  R +VS
Sbjct:  507 SAVPSLDDITNFYRDVFRRSQMEADCIVMSLIYIERLIKDTNGGVRPRPSNWRSILFSCMVMSSKVWDDLSMWNADFSQTCPRGVSFSLQRINELELAVLGCLRYSVKVTASEYAKYYFLLRSMLIRSGLAGEDMTNTPLNAEGVQKLEHMSANFQINAETRAEVS 672          
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Match: B8LDN3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDN3_THAPS)

HSP 1 Score: 158 bits (400), Expect = 4.450e-44
Identity = 78/151 (51.66%), Postives = 114/151 (75.50%), Query Frame = 0
Query:    4 TVVPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRPLPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPM---FTLVRLNQLEVAVLELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAP-IHPLDMEDVRVLEQ 150
            T VP+L ++TA++R ++ R++++ DCI+++LIY+ERL+K+T GALRP  +NW+SL+ S ++LSSKVWDD SMWN DFS++ P    F+L R N+LE+A+L  L + VKV + EYAKYYF LRSM  R GL+ D+   ++PLD + V  LE+
Sbjct:  148 TPVPTLEDVTAFYRDIFLRSQMEVDCIIITLIYIERLIKKTEGALRPTYYNWRSLLFSCMVLSSKVWDDLSMWNCDFSKIGPSGVTFSLQRTNELEIALLSALDYKVKVGAGEYAKYYFLLRSMLCRSGLANDNLTMLNPLDAKGVGSLEK 298          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55927.13021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI84_ECTSI2.190e-7768.54WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A1E7FAH8_9STRA6.580e-4955.70Cyclin N-terminal domain-containing protein (Fragm... [more]
A0A7S2SV86_9STRA6.980e-4852.08Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9ZM94_9STRA3.920e-4749.10Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4AWA7_9STRA5.240e-4753.80Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S2I4W4_9STRA7.910e-4755.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3DPP7_9STRA1.900e-4651.25Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1BXU3_9STRA4.170e-4548.17Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2EB28_9STRA4.390e-4550.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8LDN3_THAPS4.450e-4451.66Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 10..107
e-value: 4.0E-7
score: 29.8
NoneNo IPR availableGENE3D1.10.472.10coord: 3..158
e-value: 3.1E-10
score: 42.0
NoneNo IPR availablePANTHERPTHR14248FAMILY NOT NAMEDcoord: 5..151
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 15..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55927contigH-elongata_contig55927:270..2788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55927.13021.1mRNA_H-elongata_contig55927.13021.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55927 270..2788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55927.13021.1 ID=prot_H-elongata_contig55927.13021.1|Name=mRNA_H-elongata_contig55927.13021.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=179bp
GRGTVVPSLREITAYFRHLYHRARLKFDCIVVSLIYVERLMKETRGALRP
LPFNWKSLVMSTLLLSSKVWDDHSMWNRDFSELCPMFTLVRLNQLEVAVL
ELLRFNVKVLSSEYAKYYFHLRSMCVRGGLSMDHAPIHPLDMEDVRVLEQ
KQIRAGHASILRVQVSMSGYAFPGKYAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf