prot_H-elongata_contig55763.13009.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A6A3ADU5_HIBSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ADU5_HIBSY) HSP 1 Score: 61.2 bits (147), Expect = 2.050e-9 Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLDE 63
KSR+ ARG QI DF TF+P+ + ++N+ +A+A +K W LRQ+DI AF+ +L E
Sbjct: 425 KSRLVARGFSQIPGQDFQDTFSPVAKSTTINVILALAVQKRWCLRQVDINNAFLNGYLQE 484
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A438FCK8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FCK8_VITVI) HSP 1 Score: 59.3 bits (142), Expect = 9.630e-9 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLD 62
K+R+ ARG Q + +D+ +TF+P+ +V + +A+A KDW LRQ+D+ AF+ LD
Sbjct: 304 KARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLRQMDVKNAFLHGELD 362
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A438G3H4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G3H4_VITVI) HSP 1 Score: 59.3 bits (142), Expect = 9.710e-9 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLD 62
K+R+ ARG Q + +D+ +TF+P+ +V + +A+A KDW LRQ+D+ AF+ LD
Sbjct: 416 KARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLRQMDVKNAFLHGELD 474
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A5B6WJG1_9ROSI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6WJG1_9ROSI) HSP 1 Score: 59.3 bits (142), Expect = 9.820e-9 Identity = 23/59 (38.98%), Postives = 40/59 (67.80%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLD 62
K+R+ A+G Q+ DF +TF+PI+ ++ + +++A K WLLRQ+D+ AF+ +LD
Sbjct: 861 KARLVAKGYSQVPGCDFKETFSPIIKPATIQVILSIAVSKGWLLRQVDVNNAFLNGNLD 919
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A5C788_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5C788_VITVI) HSP 1 Score: 59.3 bits (142), Expect = 9.840e-9 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLD 62
K+R+ ARG Q + +D+ +TF+P+ +V + +A+A KDW LRQ+D+ AF+ LD
Sbjct: 791 KARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALAANKDWDLRQMDVKNAFLHGELD 849
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A438EVT0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EVT0_VITVI) HSP 1 Score: 58.9 bits (141), Expect = 1.350e-8 Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLDE 63
K+R+ ARG Q + +D+S TF+P+ SV + +++A + W++RQLDI AF+ L+E
Sbjct: 768 KARLVARGYAQTYGVDYSYTFSPVAKLNSVQLFISIAASQHWMIRQLDIKNAFLHGDLEE 827
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A2N9GLZ4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GLZ4_FAGSY) HSP 1 Score: 58.2 bits (139), Expect = 2.520e-8 Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLDE 63
K+R+ A+G Q H IDF++TF+P++ +V + +++A +WLLRQLD+ AF+ L E
Sbjct: 964 KARLVAKGFHQQHGIDFTETFSPVIKPPTVRLILSLAVSLNWLLRQLDVKNAFLHGTLKE 1023
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: UPI001D006927 (uncharacterized protein LOC123046761 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D006927) HSP 1 Score: 57.8 bits (138), Expect = 3.430e-8 Identity = 24/62 (38.71%), Postives = 40/62 (64.52%), Query Frame = 0
Query: 2 KPKSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLDE 63
K K+R+ ARG Q H ID+ TF+P++ +V + +++A + W+LRQ+D+ AF+ L E
Sbjct: 44 KHKARLVARGFTQQHGIDYGDTFSPVVKPTTVRLVLSLAVSRGWILRQIDVSNAFLHGFLAE 105
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A6A2WRB0_HIBSY (Putative Cation/H+ exchanger 4 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WRB0_HIBSY) HSP 1 Score: 57.8 bits (138), Expect = 3.470e-8 Identity = 23/59 (38.98%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 4 KSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLD 62
K+R+ ARG Q + +D+ +TF+P+ +V + +A+A+ KDW L Q+D+ AF+ LD
Sbjct: 1329 KARLVARGFSQQYGLDYDETFSPVAKLTTVRVLLALADNKDWNLWQMDVKNAFLHGELD 1387
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Match: A0A438EKH6_VITVI (Retrovirus-related Pol polyprotein from transposon RE2 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EKH6_VITVI) HSP 1 Score: 56.6 bits (135), Expect = 3.700e-8 Identity = 22/62 (35.48%), Postives = 42/62 (67.74%), Query Frame = 0
Query: 2 KPKSRMAARGSGQIHNIDFSKTFAPILSAVSVNIAVAVANEKDWLLRQLDIPQAFIQAHLDE 63
K K+R+ A+G Q+ DF++TF+P++ + ++ + + +A K+W++RQLDI AF+ L +
Sbjct: 80 KYKARLVAKGFHQVAGFDFNETFSPVVKSTTIRVVLTIALAKNWVVRQLDINNAFLNGDLQK 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55763.13009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig55763.13009.1 ID=prot_H-elongata_contig55763.13009.1|Name=mRNA_H-elongata_contig55763.13009.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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