prot_H-elongata_contig55741.13003.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55741.13003.1
Unique Nameprot_H-elongata_contig55741.13003.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: B9S233_RICCO (HSF_DOMAIN domain-containing protein n=1 Tax=Ricinus communis TaxID=3988 RepID=B9S233_RICCO)

HSP 1 Score: 73.2 bits (178), Expect = 2.000e-15
Identity = 33/69 (47.83%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    1 MQLSPIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNH 68
            M+ + + PF+SK Y +V++ ST+ +VSWSSSD  ++F++ +VG FQ+++LP++F H N++SFVRQLN +
Sbjct:    1 MESNTVPPFLSKSYDMVDDPSTNSVVSWSSSD--NSFIVWNVGEFQKELLPKYFKHNNFSSFVRQLNTY 67          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: UPI0007721EB2 (heat stress transcription factor A-1b isoform X2 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI0007721EB2)

HSP 1 Score: 77.4 bits (189), Expect = 6.050e-15
Identity = 36/74 (48.65%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MQLSPIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            M+ + + PF+SK Y +V++ ST+ +VSWSSSD  ++F++ +VG FQ+++LP++F H N++SFVRQLN +G  KV
Sbjct:    1 MESNTVPPFLSKSYDMVDDPSTNSVVSWSSSD--NSFIVWNVGEFQKELLPKYFKHNNFSSFVRQLNTYGFRKV 72          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A0V0GSL0_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0GSL0_SOLCH)

HSP 1 Score: 72.0 bits (175), Expect = 1.690e-14
Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    5 PIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            P+ PF+SK Y +V++ STD +VSWS S+  ++FV+ +V  F   +LP++F H N++SFVRQLN +G  KV
Sbjct:    6 PLPPFLSKTYDMVDDRSTDSVVSWSKSN--NSFVVWNVPEFSRDILPKYFKHNNFSSFVRQLNTYGYKKV 73          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A0V0HBA1_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HBA1_SOLCH)

HSP 1 Score: 72.0 bits (175), Expect = 2.130e-13
Identity = 34/70 (48.57%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    5 PIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            P+ PF+SK Y +V++ STD +VSWS S+  ++FV+ +V  F   +LP++F H N++SFVRQLN +G  KV
Sbjct:   11 PLPPFLSKTYDMVDDRSTDSVVSWSKSN--NSFVVWNVPEFSRDILPKYFKHNNFSSFVRQLNTYGYKKV 78          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A7C8YQ30_OPUST (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YQ30_OPUST)

HSP 1 Score: 70.1 bits (170), Expect = 3.410e-13
Identity = 33/69 (47.83%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    6 IAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            +APF++K Y +V++ STD ++SW+ S+  D+FVI H+  F   +LP+FF H+N++SF+RQLN +G  KV
Sbjct:   22 VAPFLAKCYEMVDDPSTDCVISWNQSN--DSFVIWHMTEFSRDLLPKFFKHQNFSSFMRQLNIYGFRKV 88          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A2C9VA84_MANES (HSF_DOMAIN domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VA84_MANES)

HSP 1 Score: 72.4 bits (176), Expect = 3.530e-13
Identity = 35/72 (48.61%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    3 LSPIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            ++ + PF+SK Y +V++ ST+ +VSWSSSD  ++FV+ +V  FQ+ +LP++F H N++SFVRQLN +G  KV
Sbjct:    6 MNSVPPFLSKTYDMVDDPSTNSVVSWSSSD--NSFVVWNVPEFQKDLLPKYFKHSNFSSFVRQLNTYGFRKV 75          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A2P2JGW8_RHIMU (HSF_DOMAIN domain-containing protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JGW8_RHIMU)

HSP 1 Score: 67.4 bits (163), Expect = 4.330e-13
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    6 IAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLN 66
            IAPF+ K Y +V++ESTD I+ WS S  +D+FVI+ +  F  Q+LP++F H N++SF+RQLN
Sbjct:   12 IAPFLKKCYEMVDDESTDSIICWSQS--KDSFVIRDMTEFSVQLLPKYFKHNNFSSFIRQLN 71          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: UPI00053F3884 (heat stress transcription factor A-1e n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F3884)

HSP 1 Score: 72.0 bits (175), Expect = 4.840e-13
Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    7 APFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            APF+SK Y +V++ STD +VSWSS++   +FV+ +V  F +++LP+FF H+N+ASFVRQLN +G  KV
Sbjct:   28 APFLSKTYDMVDDISTDSVVSWSSNN--KSFVVWNVPEFSKELLPKFFKHKNFASFVRQLNTYGFRKV 93          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A6A3BTN5_HIBSY (Heat stress transcription factor A-4a n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BTN5_HIBSY)

HSP 1 Score: 68.6 bits (166), Expect = 5.810e-13
Identity = 33/71 (46.48%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    4 SPIAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            S + PF++K Y +V++ STD +VSWSSSD   +F++ +   F   +LPRFF H N++SF+RQLN +G  K+
Sbjct:    9 SSLPPFIAKTYEMVDDPSTDSVVSWSSSD--KSFIVWNPPEFAGDLLPRFFKHNNFSSFIRQLNTYGFRKI 77          
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Match: A0A6A6M427_HEVBR (HSF_DOMAIN domain-containing protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6M427_HEVBR)

HSP 1 Score: 71.6 bits (174), Expect = 6.540e-13
Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    6 IAPFVSKMYGIVNEESTD-IVSWSSSDGEDTFVIKHVGVFQEQVLPRFFSHRNYASFVRQLNNHGECKV 73
            + PF+SK Y +V++ ST+ +VSWSSSD  ++FV+ +V  FQ  +LP++F H N++SFVRQLN +G  KV
Sbjct:    9 VPPFLSKTYDMVDDPSTNSVVSWSSSD--NSFVVWNVPEFQRDLLPKYFKHNNFSSFVRQLNTYGFRKV 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55741.13003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B9S233_RICCO2.000e-1547.83HSF_DOMAIN domain-containing protein n=1 Tax=Ricin... [more]
UPI0007721EB26.050e-1548.65heat stress transcription factor A-1b isoform X2 n... [more]
A0A0V0GSL0_SOLCH1.690e-1448.57Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A0V0HBA1_SOLCH2.130e-1348.57Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A7C8YQ30_OPUST3.410e-1347.83HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A2C9VA84_MANES3.530e-1348.61HSF_DOMAIN domain-containing protein n=1 Tax=Manih... [more]
A0A2P2JGW8_RHIMU4.330e-1351.61HSF_DOMAIN domain-containing protein n=1 Tax=Rhizo... [more]
UPI00053F38844.840e-1352.94heat stress transcription factor A-1e n=1 Tax=Beta... [more]
A0A6A3BTN5_HIBSY5.810e-1346.48Heat stress transcription factor A-4a n=1 Tax=Hibi... [more]
A0A6A6M427_HEVBR6.540e-1350.72HSF_DOMAIN domain-containing protein n=3 Tax=Hevea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 61..73
score: 63.08
coord: 9..32
score: 31.31
coord: 48..60
score: 51.87
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 5..72
e-value: 1.4E-5
score: 25.2
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 9..69
e-value: 8.6E-16
score: 58.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..73
e-value: 7.7E-19
score: 69.9
NoneNo IPR availablePANTHERPTHR10015:SF310HEAT STRESS TRANSCRIPTION FACTOR A-1Bcoord: 6..73
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 6..73
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 5..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55741contigH-elongata_contig55741:3582..3800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55741.13003.1mRNA_H-elongata_contig55741.13003.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55741 3582..3821 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55741.13003.1 ID=prot_H-elongata_contig55741.13003.1|Name=mRNA_H-elongata_contig55741.13003.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MQLSPIAPFVSKMYGIVNEESTDIVSWSSSDGEDTFVIKHVGVFQEQVLP
RFFSHRNYASFVRQLNNHGECKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf