prot_H-elongata_contig55687.12994.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig55687.12994.1
Unique Name	prot_H-elongata_contig55687.12994.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	98

Homology

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 5.060e-49
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            DS++CQ+WFD+VF PFVK+ TGKKV LLWDNCPGH IK+DDPQI IIFLPPNVTSV+QPMDMGIL ALKCQYKTEMVA+LA LI+ WD VRARKIRR
Sbjct:  219 DSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRR 315

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.580e-48
Identity = 79/97 (81.44%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            DS++CQ+WFD+VF PFVK+ TGKKV LLWDNCPGH IK+DDPQI IIFLPPNVTSV+QPMDMGIL ALKCQYKTEMVA+LA LI+ WD VRARKIRR
Sbjct:  424 DSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRR 520

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 4.830e-48
Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            D++ICQ+WFD+VF PFVK  T KKVALLWDNCPGH IKS+DPQI IIFLPPNV SVYQPM+MGIL  LKCQYKTEMVA+LA LIEDWDTVRARKI+R
Sbjct:  256 DAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQR 352

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 9.550e-47
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            D++ICQ WFD VF PFVK  T KKVALLWDNCPGH IKS+DPQI IIFLPP +TSVYQPMDMGIL  LKC+YKTEMVA+LA LIEDWDTVRARK +R
Sbjct:   54 DAAICQ-WFDKVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPEITSVYQPMDMGILFVLKCRYKTEMVARLADLIEDWDTVRARKFQR 149

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 8.870e-46
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    7 QWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIR 96
            +WFD VF PFVK+ TGKKVALLWDNCPGH IK+DDPQI IIFLPPNV SV+QPMDMGIL ALKCQYKTEMV +LAALIEDWDT RAR+IR
Sbjct:  148 RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIR 237

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5JEK6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK6_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 1.140e-43
Identity = 73/97 (75.26%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            D++ICQ+WFD+VF  FVK  T KKVALLWDNCPGH I S+DPQI I+FLPPNV SVYQPMDMGIL  LKCQY+ E +A+LA LIEDWDTVRARKI+R
Sbjct:  392 DAAICQRWFDEVFVAFVKGKTSKKVALLWDNCPGHKINSNDPQIFIMFLPPNVISVYQPMDMGILFVLKCQYRNEKMARLADLIEDWDTVRARKIQR 488

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5KII5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII5_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 9.780e-42
Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKI 95
            D+S+CQ+WFD+VF PF+   T +KVAL+WDNCPGH I ++DPQI IIFLPP VTSV+QPMDMG L  LKC YKTEMV +L+ +IEDWDTVRAR I
Sbjct:  165 DASLCQRWFDEVFVPFINSKTARKVALIWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGGLFTLKCHYKTEMVVRLSGVIEDWDTVRARNI 259

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.390e-41
Identity = 71/97 (73.20%), Postives = 81/97 (83.51%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            D++I Q+WFD+VF PFVK  T  KVALLWD  PGH IKS+DPQI +IFLPPNV SVYQPM MGIL  LK QYKTEMVA+LA LIEDWDTVRAR+++R
Sbjct:  232 DAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPMGMGILLVLKRQYKTEMVARLADLIEDWDTVRARQLQR 328

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 2.930e-40
Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            D+S+CQ+WFD+VF PFVK  T +KV L WDNCPGH I ++DPQI IIFLPP VTSV+QPMDMG L  LKCQ K EMV +L+ +IEDWDTVRAR I R
Sbjct:  209 DASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGALFTLKCQNKPEMVVRLSDVIEDWDTVRARNIPR 305

[Close]

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Match: A0A6H5KQ75_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ75_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 7.840e-38
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0

Query:    1 DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLPPNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR 97
            DS++CQ+WFD+VF PFVK+ TGKKVALLWDNCPGH IK+DDPQI              PM+MGIL ALKCQYKT+MV +LA LIEDWDT RARKIRR
Sbjct:  370 DSALCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQI--------------PMNMGILFALKCQYKTDMVMRLATLIEDWDTARARKIRR 452

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot

BLAST of mRNA_H-elongata_contig55687.12994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JEY2_9PHAE	5.060e-49	81.44	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5JV64_9PHAE	2.580e-48	81.44	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JNS8_9PHAE	4.830e-48	81.44	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KIE7_9PHAE	9.550e-47	79.38	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JLK3_9PHAE	8.870e-46	83.33	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JEK6_9PHAE	1.140e-43	75.26	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KII5_9PHAE	9.780e-42	69.47	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5K051_9PHAE	3.390e-41	73.20	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KFG9_9PHAE	2.930e-40	69.07	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KQ75_9PHAE	7.840e-38	69.07	HTH CENPB-type domain-containing protein (Fragment...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 1..86 e-value: 8.5E-16 score: 58.1
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 1..79
None	No IPR available	PANTHER	PTHR19303:SF11	JERKY PROTEIN HOMOLOG	coord: 1..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig55687	contig	H-elongata_contig55687:3272..3565 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig55687.12994.1	mRNA_H-elongata_contig55687.12994.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig55687 3272..3565 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig55687.12994.1 ID=prot_H-elongata_contig55687.12994.1|Name=mRNA_H-elongata_contig55687.12994.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
DSSICQQWFDDVFTPFVKQATGKKVALLWDNCPGHIIKSDDPQITIIFLP
PNVTSVYQPMDMGILHALKCQYKTEMVAKLAALIEDWDTVRARKIRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom