prot_H-elongata_contig55664.12991.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55664.12991.1
Unique Nameprot_H-elongata_contig55664.12991.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: D8LE14_ECTSI (TPR Domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE14_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.700e-59
Identity = 104/152 (68.42%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQANAT----RNTWLQRLAPSISKPGLSKVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQ 148
            MSDYH+LAFSS+RSGRH+MEGLA+YSAGVTMD +GQY KALENY KFLAVCK   DP +EGVCHNCMGVD ML ACPP SNMQ N T    R   L R A    +  L K ADDA + +AHSNIGLCHG+M DY  +A HHQEAL+ ALRVQ
Sbjct:  193 MSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKALENYKKFLAVCKTLKDPFIEGVCHNCMGVDYMLTACPPASNMQENTTGLPARAVALLRKALEHHEEHL-KGADDAGSGVAHSNIGLCHGLMGDYPRAAKHHQEALRVALRVQ 343          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A6H5LCZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCZ2_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 4.130e-55
Identity = 99/160 (61.88%), Postives = 115/160 (71.88%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQA------NATRNTWLQRLAPSISKPGLS------KVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQ 148
            MSDY++LAFSS+RSGRH+MEGLA+YSAGVTMD +GQY KA+ENY KFLAVCK   D  +EGVCHNCMGVD MLMACPP SNMQ            T L   A ++ +  L       K ADDA + +AHSNIGLCHG+M DY  +A HHQEAL+ ALRVQ
Sbjct:  190 MSDYNMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAIENYKKFLAVCKTLKDLFIEGVCHNCMGVDYMLMACPPASNMQPALDVTKEKENTTGLPARAVALLRKALEHHEEHLKGADDAGSGVAHSNIGLCHGLMGDYPKAAKHHQEALRVALRVQ 349          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A7S2C237_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C237_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.620e-39
Identity = 70/154 (45.45%), Postives = 102/154 (66.23%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQANATRNTWLQRLAPSISKPGLS------KVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQ 148
            +SDY +LAFSS+R+G+ +MEG A+ +  +T+D + QY KA+E+YGKFL+VC+   DP +EG+ +NC+GVDCMLMACPP    Q    R    +  A    K  +        +ADD   ++AH+N+GLC G++ D   +A HHQEAL+ A+R+Q
Sbjct:  157 VSDYSMLAFSSQRAGKTQMEGQAYLAIAITLDNMQQYTKAIESYGKFLSVCEKMGDPVIEGLAYNCLGVDCMLMACPPSEGSQFEGVRTVTPESQA--TLKRAIRYHQRHLDIADDGGQFVAHTNLGLCLGLLGDNQPAAQHHQEALRVAIRLQ 308          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A836C9X6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X6_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.560e-28
Identity = 67/154 (43.51%), Postives = 88/154 (57.14%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQA---NATRNTWLQRLAPSISKPGLSKVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQVRA 151
            +SDY +LA SS+R+GR +MEGLA++  GV  D +GQY KALE Y K+L VC+ + D Q E + HNCMGVDC  +ACPPG+N  A    A     L R A   S      +ADD  A +A +N+GL   +             AL+AA R +  A
Sbjct:   94 ISDYTVLASSSQRAGRPQMEGLAYFCIGVLYDNMGQYGKALEAYKKYLGVCRRTDDKQGEALAHNCMGVDCHYLACPPGANAAALVLMAAARAALARAAEHHSAH--LALADDGGACVARTNLGLAAALAGXXXXXXXXXXAALRAAARARAPA 245          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: J9JA71_9SPIT (TPR Domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9JA71_9SPIT)

HSP 1 Score: 91.7 bits (226), Expect = 8.500e-19
Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQANATRNTWLQRLAPSISKPGLS------KVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRV 147
            + DY+ILAF+ KR+G+ + EG A+YS GV  D +G+Y++A++ Y +FL VCK   D   E + +NC+GVD M +                      P + K  +       ++AD A  ++AH N+GL +  + D+  ++ +HQ AL+ A+++
Sbjct:  138 LKDYNILAFACKRAGKSRDEGRAYYSTGVLFDNLGKYKQAIDQYKRFLQVCKAIGDAHGEALSYNCIGVDYMKLG------------------ESEPQLYKDAIEYHTKHKEIADVAGKFLAHINLGLIYNNIGDHEKASINHQFALRYAIQM 272          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A7S1AIM4_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AIM4_NOCSC)

HSP 1 Score: 88.2 bits (217), Expect = 1.600e-17
Identity = 51/158 (32.28%), Postives = 86/158 (54.43%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQANATRNTWLQRL----APSISKPGLS------KVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQ 148
            + D  +L F+  R+G+ + EG A ++ G+  D IGQYRK +E Y KFL VCK+  D Q   + ++C+ VD  L+    G    A++  N+ L+       P++ K  +S      + AD    ++AH N+GL +  + +   +  +HQ AL+ ALR++
Sbjct:  168 IQDLDLLTFACHRAGKFREEGRAFFTLGLLRDNIGQYRKGIEAYNKFLRVCKDCDDSQGCALANHCIAVDYQLLG---GGGAVASSEANSGLEEAQSATVPALLKKSISFHSKHRESADGVGKFVAHLNLGLAYASLGERESATVNHQYALRYALRLR 322          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A8J8NP76_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP76_HALGN)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-13
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLM 74
            + DY+ILAF+ KR+G+ + EG A+YS GV  D +G+Y+ A+E Y +FL VCK   D   E + +NC+GVD M +
Sbjct:  137 LKDYNILAFACKRAGKSRDEGRAYYSTGVLYDNLGKYKAAIEQYKRFLQVCKAIGDVHGEALSYNCIGVDYMKL 210          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A078AHX3_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AHX3_STYLE)

HSP 1 Score: 77.0 bits (188), Expect = 1.400e-13
Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAVCKNSSDPQVEGVCHNCMGVDCMLM 74
            + DY+ILAF+ KR+G+ + EG A+YS GV  D +G+Y++A++ Y +FL VCK   D   E + +NC+GVD M +
Sbjct:  134 LKDYNILAFACKRAGKSRDEGRAYYSTGVLYDNLGKYKQAIDQYKRFLQVCKAIGDVHGEALSYNCIGVDYMKL 207          
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Match: A0A7S2UWM0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.270e-5
Identity = 19/42 (45.24%), Postives = 34/42 (80.95%), Query Frame = 0
Query:  107 VADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQ 148
            + DD    +AH+N+GLC+G+++ + ++A+HHQEAL+ AL++Q
Sbjct:  328 ITDDGGKCVAHTNMGLCYGLLNKFPVAATHHQEALRMALKIQ 369          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55664.12991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LE14_ECTSI4.700e-5968.42TPR Domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LCZ2_9PHAE4.130e-5561.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2C237_9STRA8.620e-3945.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836C9X6_9STRA1.560e-2843.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
J9JA71_9SPIT8.500e-1932.68TPR Domain containing protein n=1 Tax=Oxytricha tr... [more]
A0A7S1AIM4_NOCSC1.600e-1732.28Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A8J8NP76_HALGN1.040e-1347.30Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
A0A078AHX3_STYLE1.400e-1345.95Uncharacterized protein n=1 Tax=Stylonychia lemnae... [more]
A0A7S2UWM0_9STRA2.270e-545.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..152
e-value: 2.1E-8
score: 35.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55664contigH-elongata_contig55664:137..1596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55664.12991.1mRNA_H-elongata_contig55664.12991.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55664 137..1596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55664.12991.1 ID=prot_H-elongata_contig55664.12991.1|Name=mRNA_H-elongata_contig55664.12991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MSDYHILAFSSKRSGRHKMEGLAHYSAGVTMDGIGQYRKALENYGKFLAV
CKNSSDPQVEGVCHNCMGVDCMLMACPPGSNMQANATRNTWLQRLAPSIS
KPGLSKVADDADAWIAHSNIGLCHGMMSDYIISASHHQEALKAALRVQVR
ACTLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf