prot_H-elongata_contig55611.12985.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55611.12985.1
Unique Nameprot_H-elongata_contig55611.12985.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: D7FR29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR29_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 1.060e-100
Identity = 150/203 (73.89%), Postives = 168/203 (82.76%), Query Frame = 0
Query:    2 ALILPGFAHTGELRTSGRNPEKYFVTSPIEVAIQPFVETGFVSNGTWFNGSAREASTSRRANRITWTVPVPTAMGLDMSALPSPAKEREKGEGQMARHARQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILMHNSVGCFNKGGQLSMSILYYRPKYIGIGNEVFVELDDEEAVTEAFFCGEEG 204
            ALILPGF H GE++TSGR P++Y+VT P+EVAIQPF+ TG   NGTWFNG+ REAS SRRANRITWTVPVPTAMGLD + LP P  ERE+GE Q +RH RQG RRIA TNFNG+PQDPEAAEVRAKL+  LA DGV P KG DGRVRSGILM+NSV CF K G+L+MSILY+RPKYIGIGNEVFVELD EEAVTE    G+ G
Sbjct:  167 ALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTTREASQSRRANRITWTVPVPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPAKGADGRVRSGILMYNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVG 369          
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: A0A6H5L2A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A9_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 1.570e-99
Identity = 150/203 (73.89%), Postives = 169/203 (83.25%), Query Frame = 0
Query:    2 ALILPGFAHTGELRTSGRNPEKYFVTSPIEVAIQPFVETGFVSNGTWFNGSAREASTSRRANRITWTVPVPTAMGLDMSALPSPAKEREKGEGQMARHARQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILMHNSVGCFNKGGQLSMSILYYRPKYIGIGNEVFVELDDEEAVTEAFFCGEEG 204
            ALILPGF H GE++TSGR P++Y+VT P+EVAIQPF+ TG   NGTWFNG+ REAS SRRANRITWTVP+PTAMGLD + LP P  ERE+GE Q +RH RQG RRIA TNFNG+PQDPEAAEVRAKL+  LA DGV P+KG DGRVRSGILMHNSV CF K G+L+MSILY+RPKYIGIGNEVFVELD EEAVTE    G+ G
Sbjct:  340 ALILPGFCHDGEIKTSGRKPDEYYVTGPLEVAIQPFIATGNFPNGTWFNGTRREASQSRRANRITWTVPIPTAMGLDPTKLPEPPSERERGEDQRSRHVRQGARRIAVTNFNGIPQDPEAAEVRAKLLKRLAADGVEPSKGADGRVRSGILMHNSVACFTKAGKLAMSILYHRPKYIGIGNEVFVELDPEEAVTEEVVEGKVG 542          
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: A0A835YSS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS2_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.510e-40
Identity = 85/191 (44.50%), Postives = 112/191 (58.64%), Query Frame = 0
Query:    1 MALILPGFAHTGELRTSGRNPEKYFVTSPIEVAIQPFVETGFVSNGTWFNGSAREASTSRRANRITWTVPVPTAMGLDMSALPSPAKEREKG-EGQMARHARQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILMHNSVGCFNKGGQLSMSILYYRPKYIGIGNEVFVELDD 190
            MA +LP F+ T  + T GR PEKYF TSPIE  I P +ET  VSN    NGS     T  RANRITW V VP + GL+  A+P P  E      G      RQ  R +A  N+NG  QD EA E+RAKL+  L+ D      G +GR ++G +  +    FNK G++S+++  YRPK +G GN+V+VEL++
Sbjct:  207 MAYVLPDFSFTSSVNTRGRVPEKYFTTSPIEAEITPLIETNTVSNE---NGSLGSVQT--RANRITWAVQVPASFGLEAGAMPDPRGEGYNPLNGDAIEFERQDRRVVAVANYNGSVQDKEAVELRAKLLEQLSMDKAKVALGPEGRPKAGFMSFDGKVGFNKQGRVSIAVYEYRPKILGKGNKVYVELEE 392          
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: A0A6V1P7S5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P7S5_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 2.000e-13
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 0
Query:    2 ALILPGFAHTGELRTSGRNPEKYFVTSPIEVAIQPFVETGFVSNGTWFNGSA-REASTSRRANRITWTVPVPTAMGLDMSALPSPAKEREKGEGQMAR--HARQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILMHNSVGCFNKGGQLSMSILYYRPKYIGIGNEVFVEL 188
            A  LP    +  +   G+ PE+++VTSPIEV+               F G   +E    ++ N I W V +P A GL++  LP P       E Q  R  H   G RR+A   FNG  QD   ++ RA+L++    DG     G  GR +   L +++   F + G L ++   Y P++   GNE+ +EL
Sbjct:  252 ARTLPESMFSCTISMIGKIPERFYVTSPIEVS---------------FRGKMLKEGDAQKKVNAIQWKVGLPKAFGLELGGLPDPDGRETAQEMQDDRVWHQVDGPRRVAVARFNGQNQDVGVSKARAELLAKAQEDGHELLLGNSGRPQFSFLQNDAKVGFKRTGGLGVA--GYEPRW-DTGNEIALEL 423          
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: A0A7S2BLZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLZ7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.240e-11
Identity = 62/187 (33.16%), Postives = 88/187 (47.06%), Query Frame = 0
Query:    4 ILPGFAHTGELRTSGRN-PEKYFVTSPIEVAIQPFVETGFVSNGTWFNGSAREASTSRRANRITWTVPVPTAMGLDMSALPS--PAKEREKGE--GQMARHARQGF-----RRIAATNFN-GLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILMHNSVG-CFNKGGQLSMSILYYRPKYI 178
             LP FA TG ++  G+   E    TSP+ V+I+         +   F+G        ++  + TWT+PVP+  GLDM+ LP   P  ERE+GE  G  A  A   F     RRIA   F  G     EA++VR KL+++L  DG               L  N+V  C+ +GG   M++   RP Y+
Sbjct:  287 FLPNFAFTGPIKQRGKFIAEDLVATSPLSVSIEAV-------DSAVFDG--------KKIKQATWTIPVPSEHGLDMTNLPPVPPLDEREEGELIGPCAPTAYAAFELVPARRIAVVPFGMGDTVSQEASDVRRKLLNALERDGRRFRLSASSNKPLFTLHENTVKLCWTRGGAHGMAVYSPRPSYL 458          
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Match: A0A8J2SS52_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SS52_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.040e-5
Identity = 38/140 (27.14%), Postives = 70/140 (50.00%), Query Frame = 0
Query:   61 RANRITWTVPVPTAMGLDMSALPSPAKEREKGEGQMA---------RHARQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSGILM--HNSVGCFNKGGQLSMSILYYRPKYIGI-GNEVFVEL 188
            R  R+TW +P+PTA+GLD ++LP   ++ E  +G +           +A Q  +     +++G PQD  AA +R  L  +    G++   G +G     +L      +G ++  G L+ ++    P ++ + GNE+ VE+
Sbjct:  294 RKRRVTWALPLPTALGLDFASLPELPRKAELNDGGLELGVAENPSLTYALQPAKLYVCASYSGDPQDAAAAPLRKALAEAAVAQGLSLVPGANGGAAPAVLRKWRAKLG-YSDVGALAYAMESNAPSWVSVDGNELCVEV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55611.12985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FR29_ECTSI1.060e-10073.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2A9_9PHAE1.570e-9973.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSS2_9STRA7.510e-4044.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1P7S5_HETAK2.000e-1331.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BLZ7_9STRA5.240e-1133.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SS52_9STRA4.040e-527.14Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55611contigH-elongata_contig55611:2390..3680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55611.12985.1mRNA_H-elongata_contig55611.12985.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55611 2390..3689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55611.12985.1 ID=prot_H-elongata_contig55611.12985.1|Name=mRNA_H-elongata_contig55611.12985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MALILPGFAHTGELRTSGRNPEKYFVTSPIEVAIQPFVETGFVSNGTWFN
GSAREASTSRRANRITWTVPVPTAMGLDMSALPSPAKEREKGEGQMARHA
RQGFRRIAATNFNGLPQDPEAAEVRAKLISSLANDGVTPNKGKDGRVRSG
ILMHNSVGCFNKGGQLSMSILYYRPKYIGIGNEVFVELDDEEAVTEAFFC
GEEGEEAQENAAV*
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