prot_H-elongata_contig55590.12981.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55590.12981.1
Unique Nameprot_H-elongata_contig55590.12981.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length365
Homology
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BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 4.610e-21
Identity = 48/84 (57.14%), Postives = 58/84 (69.05%), Query Frame = 0 
Query:   11 ILCATADFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSKHTSVSQLQYAFDCGLPRSIAICNAAGRLGNLDLLRCARAKGCPW 94
            I+    +FV+  QYLFFASVSR WR  WG+RP +T  L+  TSVSQL  +F+CGL R+ A+C     LG LDLLR ARA GCPW
Sbjct:   11 IVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPW 94
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BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Match: D7FWU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU0_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 5.490e-18
Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 0 
Query:   17 DFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSKHTSVSQLQYAFDCGLPRSIAICNAAGRLGNLDLLRCARAKGCPWG 95
            ++V+H QYLFFA+V R W ++WG RP +T   +  TSVSQL ++F CGL R+  IC  A +LG LDLL+CA   GCP G
Sbjct:   21 EYVDHNQYLFFATVCRGWSRAWGERPAVTRAATNGTSVSQLSFSFHCGLRRTKGICETAAKLGRLDLLQCAVLNGCPIG 99
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BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.920e-18
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0 
Query:    7 NIDGILCATADFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSKHTSVSQLQYAFDCGLPRSIA-ICNAAGRLGNLDLLRCARAKGCPW 94
            N+D +L +   FV   Q+LFFA VSR WR++WG RP +TS++++ +SVSQL+Y+F+ GLPR    +C A  RLGNL+LLR AR  GC W
Sbjct:   60 NVD-LLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAW 147
[Close]
BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Match: D7G822_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G822_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 7.050e-12
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0 
Query:   16 ADFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSKHTSVSQLQYAFDCGLPRSI---AICNAAGRLGNLDLLRCARAKGCPW 94
            A+FV+  QYLF A VS+ +R++WG R  +T  +   TSV QL Y  + GLP SI    ICNAA R G LDLL+ A+   C W
Sbjct:    5 AEFVDQDQYLFIAPVSKAFRRAWGPRATVTRPVVADTSVRQLTYCLELGLPSSIRQATICNAAARFGRLDLLKLAQESACGW 86
[Close]
BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Match: A0A6H5K3L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L5_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.280e-11
Identity = 39/82 (47.56%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:   16 ADFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSKHTSVSQLQYAFDCGLPRSI---AICNAAGRLGNLDLLRCARAKGCPW 94
            A+FV+  QYLF A V + +R++WG R  +T  +   TSV QL Y  + GLP SI    ICNAA R G LDLL+ A+   C W
Sbjct:    5 AEFVDQDQYLFIAPVLKAFRRAWGPRATVTRPVVADTSVRQLTYCLELGLPSSIRQATICNAAARFGRLDLLKLAQGSACGW 86
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55590.12981.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FMS7_ECTSI4.610e-2157.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWU0_ECTSI5.490e-1853.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPZ6_9PHAE6.920e-1852.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G822_ECTSI7.050e-1248.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3L5_9PHAE2.280e-1147.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 67..362
e-value: 4.7E-21
score: 76.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 100..350
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 311..363
coord: 232..313
coord: 68..233
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 311..363
coord: 232..313
coord: 68..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55590contigH-elongata_contig55590:1501..2595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55590.12981.1mRNA_H-elongata_contig55590.12981.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55590 1501..2595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55590.12981.1 ID=prot_H-elongata_contig55590.12981.1|Name=mRNA_H-elongata_contig55590.12981.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=365bp
MIHNPLNIDGILCATADFVEHGQYLFFASVSRRWRKSWGRRPKLTSFLSK
HTSVSQLQYAFDCGLPRSIAICNAAGRLGNLDLLRCARAKGCPWGAWTCR
EAAMAGHLDLIRWARRHGCAWNTQMCWGAAEKGHLHVLQWARANGCPWSA
LTCWGAAEGGHLDVLRWARNQGCPWNEHTCSRAAERGHLHVLQWARANGC
PWDEETCWGAAEGGHLDVLRWAKENGCPWDAWTCQGAALGGHLEILRWAR
ENDCPWDEDTCASAAKNGHLDILRWVRQNGCPWGGRTCSRAAARGFLDVL
RWARENGCPWDEATCAAAAENGHLDIVRWARQNGCPWDESTCRRAIERGH
YGVAAWARLNGCPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf