prot_H-elongata_contig55501.12966.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55501.12966.1
Unique Nameprot_H-elongata_contig55501.12966.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 6.050e-30
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            MIKCSVCQDKKKNRVITKCFHMFCDGCLE+SIKSRNRKCPAC K Y  DDVHELWLT
Sbjct:  834 MIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACGKVYAPDDVHELWLT 890          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A7S2Y421_9STRA (E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y421_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.280e-20
Identity = 34/57 (59.65%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            M++CSVCQD++KN V+TKCFHMFC  C+++++K R+RKCPAC + +G DDV  +WLT
Sbjct:  269 MLRCSVCQDRRKNTVLTKCFHMFCRECVQENLKIRSRKCPACGRMFGQDDVRTIWLT 325          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A662Y869_9STRA (E3 ubiquitin protein ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y869_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.750e-20
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++KCSVCQD++K+ +ITKCFHMFC  C++ ++KSRNRKCP C K +G DDV  +WLT
Sbjct:  812 LVKCSVCQDRRKDVIITKCFHMFCKECVDNNLKSRNRKCPTCKKMFGQDDVKAVWLT 868          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: K3WQG6_GLOUD (E3 ubiquitin protein ligase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQG6_GLOUD)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++KN +I+KCFHMFC  C++ ++KSRNRKCP C K +G DDV  +W T
Sbjct:  775 LVNCSVCQDQRKNVLISKCFHMFCKDCIDSNLKSRNRKCPTCKKMFGQDDVKSVWFT 831          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: G4YGB4_PHYSP (E3 ubiquitin protein ligase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB4_PHYSP)

HSP 1 Score: 89.0 bits (219), Expect = 2.890e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++K+ +I+KCFHMFC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  755 LVNCSVCQDRRKDVIISKCFHMFCKECIENNLKSRNRKCPTCKKMFGHDDVKSVWFT 811          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: W2QVV9_PHYPN (E3 ubiquitin protein ligase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QVV9_PHYPN)

HSP 1 Score: 89.0 bits (219), Expect = 2.890e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++K+ +I+KCFHMFC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  781 LVNCSVCQDRRKDVIISKCFHMFCKECIENNLKSRNRKCPTCKKMFGHDDVKSVWFT 837          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A484E9R0_BRELC (E3 ubiquitin protein ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9R0_BRELC)

HSP 1 Score: 89.0 bits (219), Expect = 2.890e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++K+ +ITKCFH+FC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  801 LVNCSVCQDRRKDVIITKCFHIFCKECIENNLKSRNRKCPTCKKMFGQDDVKTVWFT 857          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A5D6XN03_9STRA (E3 ubiquitin protein ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN03_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.890e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++KCSVCQD++KN ++ KCFHMFC  C++ ++KSRNRKCP C K +G DDV  +W T
Sbjct:  804 LVKCSVCQDQRKNVLLAKCFHMFCRDCVDSNLKSRNRKCPTCKKMFGQDDVKAVWFT 860          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A2P4YBG3_9STRA (E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBG3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.520e-19
Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++K+ +I+KCFHMFC  C++ ++KSRNRKCP C K +G DDV  +W T
Sbjct:  268 LVNCSVCQDRRKDVIISKCFHMFCKECIDNNLKSRNRKCPTCKKMFGHDDVKTVWFT 324          
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Match: A0A329T6M6_9STRA (E3 ubiquitin protein ligase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T6M6_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.940e-19
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDDVHELWLT 57
            ++ CSVCQD++K+ +I+KCFHMFC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  781 LVNCSVCQDRRKDVIISKCFHMFCKECIENNLKSRNRKCPTCKKMFGHDDVKTVWFT 837          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55501.12966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U9_ECTSI6.050e-3091.23E3 ubiquitin protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A7S2Y421_9STRA1.280e-2059.65E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa jap... [more]
A0A662Y869_9STRA1.750e-2061.40E3 ubiquitin protein ligase n=2 Tax=Nothophytophth... [more]
K3WQG6_GLOUD2.110e-1957.89E3 ubiquitin protein ligase n=1 Tax=Globisporangiu... [more]
G4YGB4_PHYSP2.890e-1957.89E3 ubiquitin protein ligase n=1 Tax=Phytophthora s... [more]
W2QVV9_PHYPN2.890e-1957.89E3 ubiquitin protein ligase n=9 Tax=Phytophthora T... [more]
A0A484E9R0_BRELC2.890e-1957.89E3 ubiquitin protein ligase n=1 Tax=Bremia lactuca... [more]
A0A5D6XN03_9STRA2.890e-1957.89E3 ubiquitin protein ligase n=1 Tax=Pythium brassi... [more]
A0A2P4YBG3_9STRA3.520e-1956.14E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phy... [more]
A0A329T6M6_9STRA3.940e-1957.89E3 ubiquitin protein ligase n=1 Tax=Phytophthora c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 4..42
e-value: 5.7E-6
score: 35.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 4..43
score: 11.457
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..57
e-value: 5.2E-16
score: 59.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 3..45
e-value: 1.1E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR23163:SF0E3 UBIQUITIN-PROTEIN LIGASE BRE1coord: 1..56
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 2..49
IPR013956E3 ubiquitin ligase Bre1PANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 1..56
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 19..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55501contigH-elongata_contig55501:897..1674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55501.12966.1mRNA_H-elongata_contig55501.12966.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55501 897..1677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55501.12966.1 ID=prot_H-elongata_contig55501.12966.1|Name=mRNA_H-elongata_contig55501.12966.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
MIKCSVCQDKKKNRVITKCFHMFCDGCLEQSIKSRNRKCPACTKAYGLDD
VHELWLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR013956E3_ubiquit_lig_Bre1
IPR017907Znf_RING_CS