prot_H-elongata_contig55479.12964.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55479.12964.1
Unique Nameprot_H-elongata_contig55479.12964.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
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BLAST of mRNA_H-elongata_contig55479.12964.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.710e-21
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:    1 MDANAREHLEKIESEGRDCRPGGYGRKYQFVDPDFPADTFSVGNAQCRHQLASQWKV 57
            ++ NARE LE IES+GR CRPG YGRK Q+ DPDFP D  SVGNAQCR QLASQWKV
Sbjct: 3227 VETNARESLEDIESQGRGCRPGAYGRKLQYADPDFPPDNSSVGNAQCRQQLASQWKV 3283
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BLAST of mRNA_H-elongata_contig55479.12964.1 vs. uniprot
Match: A0A7S3UUX7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUX7_HETAK)

HSP 1 Score: 60.5 bits (145), Expect = 1.790e-9
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:    4 NAREHLEKIESEGRDCRPGGYGRKYQFVDPDFPADTFSVGNAQCRHQLASQWKV 57
            NARE L+ IE+E +DC+ G YGR+YQFVDP FPA   S+G+ +    L   WK 
Sbjct:  167 NAREKLDAIEAEQKDCKAGRYGRRYQFVDPAFPATEASLGSPELA-ALVKSWKA 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55479.12964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ17_ECTSI2.710e-2173.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UUX7_HETAK1.790e-951.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55479contigH-elongata_contig55479:845..1018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55479.12964.1mRNA_H-elongata_contig55479.12964.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55479 845..1018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55479.12964.1 ID=prot_H-elongata_contig55479.12964.1|Name=mRNA_H-elongata_contig55479.12964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
MDANAREHLEKIESEGRDCRPGGYGRKYQFVDPDFPADTFSVGNAQCRHQ
LASQWKV*
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