prot_H-elongata_contig5542.12957.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A6H5JV52_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV52_9PHAE) HSP 1 Score: 234 bits (597), Expect = 3.530e-64 Identity = 146/275 (53.09%), Postives = 174/275 (63.27%), Query Frame = 0
Query: 207 KTEAEVEGKARRKWQALVGMLGSEDNATSGFADAVALLRGGEDMALGDLVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPG---GVEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGAKKMRPGQ-EDGHGRGSGFSTEGNGDEAEGGEGDGGRQEESEWLEVGKGGAKAVINTPDSRQRISKSSL 477
K + G A R W++L+ +LG ED GF A + G + G LV+RG++NTGNSCFR+AVLQALLACEPFV++LF AAPGLRDSI A+EALPTW QLARFAAAFEPPK + L G S G+WSTA GR EPV+PDEAMS+AFG FR+ + GEQEDAQEFLAFFLDQLHEEIV AKK +P DG RG + G E+ WLEVGKGGAKAV+N PD R+++S SS+
Sbjct: 204 KAAQDAAGLAERVWESLLQLLGGED----GFIAAGGAVGLGAGVPAGGLVHRGLINTGNSCFRNAVLQALLACEPFVQVLFRAAPGLRDSIPAKEALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAK------GAWSTAGGRXXXXXXXXXXXXXXXAAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNKPKPASDGGDRGGSADS---GTXXXXXXXXXXXXEDDAWLEVGKGGAKAVVNAPDPRKKVSNSSV 465
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: D7FJX3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX3_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.550e-55 Identity = 133/259 (51.35%), Postives = 162/259 (62.55%), Query Frame = 0
Query: 216 ARRKWQALVGMLGSEDNATSGFADAVALLRGGEDMALGDLVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGAKKM--RPGQEDGHGRGSGFSTEGNGDEAEGGEGDGGRQEESEWLEVGKGGAKAVINTPDSRQRI 472
A R W++L+ +LG E+ + +AV L G + G LV+RG++NTGNSCFR+AVLQALLACEPFV++LF AAPGLRDS+ A+EALPTW QLARFAAAFEPPK A+ LA EPV+PDEAMS+AFG FR+ + GEQEDAQEFLAFFLDQLHEEIV AKK +P + G G S GEG +E+ WLEVGKGGAKAV+N PD R+++
Sbjct: 246 AERVWESLLQLLGDENGLITA-GEAVGL---GAGVPAGGLVHRGLINTGNSCFRNAVLQALLACEPFVQVLFRAAPGLRDSVPAREALPTWAQLARFAAAFEPPKPGAAAPLAXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNNPKPASDGGSGGVSADXXXXXXXXXXXGEG----EEDDAWLEVGKGGAKAVVNAPDPRKKV 493
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: W7TN80_9STRA (USP domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN80_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.610e-18 Identity = 78/195 (40.00%), Postives = 105/195 (53.85%), Query Frame = 0
Query: 257 YRGMVNTGNSCFRSAVLQALLACEPFVKILFM--------AAPGLRD-SILA---QEALPTWVQLARFAAAFEPPKTVASTS--------------LAGGSS-QKGLAGAGRGGSWS----------TAVGRKKLGGRHHRAPGG----VEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGA 410
+RG+VN GN+CF++ VLQALLA EP ++L + ++P R S+LA Q +PTW+ +A+ A A E P VA+++ +AG S +K L G G S S A G K G R+P + P+ PD+ + +AF FRS GEQEDAQEFLAF LD+LHEE VGA
Sbjct: 133 HRGLVNAGNTCFQNLVLQALLASEPLHRLLLVLRPLVLASSSPASRSLSLLARRCQALVPTWMDMAKVAVALEDPSLVAASTASPALVMYKKKDSAVAGRKSGKKHLVGTGSSSSSSFPPLPSHPSGVANGFKLRGPLEARSPSPRDFYLAPLRPDDYLEEAFRAFRSSEAGEQEDAQEFLAFLLDRLHEEAVGA 327
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A4D9D9D9_9STRA (USP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9D9_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.380e-17 Identity = 95/258 (36.82%), Postives = 127/258 (49.22%), Query Frame = 0
Query: 257 YRGMVNTGNSCFRSAVLQALLACEPFVKILFM-----------AAPGLRDSILA---QEALPTWVQLARFAAAFEPPKTVASTS--------------LAGGSS-QKGLAGAGRGGSWST-----------AVGRKKLGGRHHRAPGG----VEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGAKKMRPGQEDGHGRGSGFSTEGNGDEAEGGEGDGGRQEESEWLEVGKGGAKAVINTPDSRQ 470
+RG+VN GN+CF++ VLQALLA EP ++L A+P L S+LA Q +PTW+ +A+ A A E P VA+++ +AG S +K L G G S S+ A G K G R+P + P+ PD+ + +AF FRS GEQEDAQEFLAF LD+LHEE VGA G E+G G E EG+GG W EVG+ G A ++ +Q
Sbjct: 226 HRGLVNAGNTCFQNLVLQALLASEPLHRLLLALRPLVLASSSPASPSL--SLLARRCQALVPTWMDMAKVAVALEDPSLVAASTASPALVMYKKKDSAVAGRKSGKKHLVGTGSSSSSSSFPPLPSHPSGVANGFKLHGPLEARSPSPRDFYLAPLRPDDYLEEAFRAFRSSEAGEQEDAQEFLAFLLDRLHEEAVGAGA---GGEEGKGA------------REEEEGEGG------WQEVGEKGRVAKLSVSGVKQ 460
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A836CGA5_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA5_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.770e-13 Identity = 67/211 (31.75%), Postives = 91/211 (43.13%), Query Frame = 0
Query: 255 LVYRGMVNTGNSCFRSAVLQALLACEPFVK-ILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGAKKMRPGQEDGHGRGSGFSTEGNGDEAEGGEGDGGRQEESEWLEVGKGGAKAVIN 464
L RGMVNTGN+C+R AVLQ+LLAC P + +L A L + A E +PTW LA+F F W +G G + V P + + + G FR GEQEDA+EFLA+FL +LH+E+ K + + H + + EW EVG+GG AV+N
Sbjct: 119 LACRGMVNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREF----------------------------WG--IGAANAG----------KAVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQAKDAEQHAVLQQAAVD------------------DEWQEVGRGGVAAVVN 271
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A833QWE1_9POAL (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QWE1_9POAL) HSP 1 Score: 72.4 bits (176), Expect = 1.180e-9 Identity = 59/181 (32.60%), Postives = 83/181 (45.86%), Query Frame = 0
Query: 255 LVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVE------PVVPDEAMSKAFGLFRSFNDG---------EQEDAQEFLAFFLDQLHEEIVGAKKMRPGQEDG 420
L+ RG+VNTGN+CF +A LQALL+C PFV+ L LRD L + A PT F + F+ P+ ++ KL G+ GG+E PV+ D + RSFN QEDAQEFL+F +DQ+H+E++ P ++G
Sbjct: 195 LIPRGLVNTGNTCFLNASLQALLSCSPFVEFL----QDLRDRALPKVAYPTLGAFVDFVSNFDMPEDSST----------------------------KLNGK-----GGIECAKSLCPVMFDPVL-------RSFNPNLSTGVSAHSRQEDAQEFLSFLMDQMHDELLKLNSGSPNSKEG 331
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A061H8E3_9BASI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061H8E3_9BASI) HSP 1 Score: 72.4 bits (176), Expect = 1.730e-9 Identity = 71/209 (33.97%), Postives = 87/209 (41.63%), Query Frame = 0
Query: 217 RRKWQALVGMLGSEDNATSGFADAVAL-----LRGGEDMALGDLVY-RGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHR----APGGVEPVVPD---EAM--SKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIVGA 410
RRK G GS +A SG A + L L + RG+VNTGN CF +A+LQ L+ C PF + + G A P + F F T A + AGG G H APG EP VP+ EAM +K F R G QEDA+EFL FFLD LHEE++GA
Sbjct: 383 RRKSGVGAGEAGSRHHAASGPAKPAVMSLERMLADSHKSFKAPLTHPRGLVNTGNFCFANAILQMLVYCAPFYNLFTLI--GREVPADFGNATPLMEAVIHFLREFVLVDTAAQVNGAGGEHDDS--------------------GEHEAVSSFAPGASEPFVPEFVYEAMRLNKRFDQMRR---GHQEDAEEFLGFFLDTLHEELIGA 566
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: UPI000540042C (ubiquitin carboxyl-terminal hydrolase 24 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI000540042C) HSP 1 Score: 70.1 bits (170), Expect = 6.140e-9 Identity = 59/166 (35.54%), Postives = 83/166 (50.00%), Query Frame = 0
Query: 247 GEDMALGDLVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQK----GLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIV 408
G +GDL+ RG++N GNSCF +A LQALL+C PF+K+L LR + + PT + F + F+ P GSS K L GR +S A+ G V+ PD A S +G R QEDAQEFL+F +D++H+E++
Sbjct: 172 GSIATMGDLLPRGLINAGNSCFINATLQALLSCSPFLKLL----QDLRTRDIPKVDYPTLIAFVDFVSEFDMPH---------GSSSKTKDSSLVETGR--PFSPAM-----------FEGVVKNFTPDVA-SDFYGWTR------QEDAQEFLSFVMDRMHDELL 304
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A0X8HVK3_9SACH (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Eremothecium sinecaudum TaxID=45286 RepID=A0A0X8HVK3_9SACH) HSP 1 Score: 70.5 bits (171), Expect = 6.340e-9 Identity = 62/164 (37.80%), Postives = 84/164 (51.22%), Query Frame = 0
Query: 251 ALGDLVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQ--LARFAA----AFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVEPVVPDEAMSKAFGLFRSFNDGEQEDAQEFLAFFLDQLHEEIV 408
A+ +V RG++N GN CF S+VLQ LL C+PF+K+L + +R S A E LP ++ + F AFE K+ SL G+ K L A + V + V+P +++SK LFR G QEDA+EFL FLDQLHEE V
Sbjct: 364 AINSIVPRGILNKGNICFMSSVLQVLLFCKPFIKMLNVV--HMRTSHKAGENLPPLLEACIEFFKGFDKNAFEKEKSEKQASL--GNGNKSLKNAAQ-------VSLSES----------VDPEPFYKSISK-LALFRDLQWGHQEDAEEFLTHFLDQLHEEFV 505
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Match: A0A5A7QE53_STRAF (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QE53_STRAF) HSP 1 Score: 69.7 bits (169), Expect = 8.020e-9 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 0
Query: 254 DLVYRGMVNTGNSCFRSAVLQALLACEPFVKILFMAAPGLRDSILAQEALPTWVQLARFAAAFEPPKTVASTSLAGGSSQKGLAGAGRGGSWSTAVGRKKLGGRHHRAPGGVEPVVPDEAMSKAF-GLFRSFNDG-EQEDAQEFLAFFLDQLHEEIV 408
D++ RG++N+GN CF +A LQALLAC PFV++L GLR+ +A+ PT L F A F+ GGS K +K + P P++ +E + K +F S + QEDAQEFL+F +DQ+H+E++
Sbjct: 176 DMLPRGLINSGNLCFLNATLQALLACSPFVQLL----QGLRNRNIAKVHHPTLAALVDFIAEFD---------AVGGSITK----------------KKDVSELEIGRP--FSPIMFEEVLRKFTPDIFGSVSGRPRQEDAQEFLSFIMDQMHDELL 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5542.12957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig5542.12957.1 ID=prot_H-elongata_contig5542.12957.1|Name=mRNA_H-elongata_contig5542.12957.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=606bpback to top |