prot_H-elongata_contig55399.12955.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55399.12955.1
Unique Nameprot_H-elongata_contig55399.12955.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length214
Homology
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: D8LME1_ECTSI (Similarities to vacuolar protein sorting-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME1_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 5.920e-118
Identity = 182/212 (85.85%), Postives = 195/212 (91.98%), Query Frame = 0
Query:    1 MHLHPLDVRVTYRSTPGSEVQDAEELTLSTIAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            MHLHPLDVR+TYR TPGS+VQDAEELTLST+AQL++ARLCLNALQLEHAFGGR VFAEV+LKHYK AFL+Q    VH VVGSFDFLGDPVGLLSNLSTGVKDFFYEP+EGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTIS LSLDTDYRK RVRERLV+GETMADSMAQGAKEFGRG+FQGVTGV+M+  L  +  G L
Sbjct:  153 MHLHPLDVRITYRGTPGSDVQDAEELTLSTMAQLNDARLCLNALQLEHAFGGRAVFAEVMLKHYKFAFLSQ----VHKVVGSFDFLGDPVGLLSNLSTGVKDFFYEPIEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISQLSLDTDYRKRRVRERLVEGETMADSMAQGAKEFGRGIFQGVTGVVMEPYLGAEKEGVL 360          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A6H5K0E6_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E6_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 6.860e-111
Identity = 181/212 (85.38%), Postives = 194/212 (91.51%), Query Frame = 0
Query:    1 MHLHPLDVRVTYRSTPGSEVQDAEELTLSTIAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            MHLHPLDVR+TYR TPGS+VQDAEELTLST+AQL++ARLCLNALQLEHAFGGR VFAEV+LKHYK AFL+Q    VH VVGSFDFLGDPVGLLSNLSTGVKDFFYEP+EGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTIS LSLDT YRK RVRERLV+GETMADSMAQGAKEFGRG+FQGVTGV+M+  L  +  G L
Sbjct: 2195 MHLHPLDVRITYRGTPGSDVQDAEELTLSTMAQLNDARLCLNALQLEHAFGGRAVFAEVMLKHYKFAFLSQ----VHKVVGSFDFLGDPVGLLSNLSTGVKDFFYEPIEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISQLSLDTGYRKRRVRERLVEGETMADSMAQGAKEFGRGIFQGVTGVVMEPYLGAEKGGVL 2402          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A835ZA73_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA73_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.710e-60
Identity = 119/210 (56.67%), Postives = 144/210 (68.57%), Query Frame = 0
Query:    1 MHLHPLDVRVTYRSTPGSEV-----------QDAEEL-TLSTIAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGV 198
            M LHP+D+R+TY+S PG E            + A EL  +ST+A+L+ A LCLNALQLEH FGGRG    ++L+HYKMA L Q       VVGSF FLGDPV L+SN+STGVKD FYEPLEGLKPDG GFL GLG+GG SLVSNT+ GTFNTF+KVTG++G+TI+ LSLD  Y++ R R R+             AK+FGR    GV GV
Sbjct: 2113 MRLHPIDLRLTYKSLPGGEDGGAXXXXXREGEGAAELGAISTLAELEGASLCLNALQLEHTFGGRGQVLGLVLRHYKMALLRQLG----GVVGSFAFLGDPVRLMSNISTGVKDLFYEPLEGLKPDGGGFLQGLGRGGQSLVSNTLGGTFNTFDKVTGAMGNTIALLSLDAAYQRDRARARMAXXXXXXXXXTC-AKDFGRSSLDGVMGV 2317          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A482SSP7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSP7_9ARCH)

HSP 1 Score: 160 bits (406), Expect = 8.010e-42
Identity = 79/200 (39.50%), Postives = 127/200 (63.50%), Query Frame = 0
Query:    1 MHLHPLDVRVTYRSTPGSEVQDAEELTLSTIAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIM 200
            + LHPLDV + +R +P  ++ +AE   +S I+QLD ARLCLNAL  E+AFG   + +E+I+KHY+ +F  Q     H ++G+ D +   VGL++N+ TG  D FYEP++GL      FL GL KGG SL S  + GT    + +TG +G  +S L+LD+D+++ R   R  +  ++++ +  G +E G+ + +GVTG+++
Sbjct: 2643 LQLHPLDVTLNFRPSPEVQISNAELAAMSIISQLDAARLCLNALIAENAFGSTTIISEIIIKHYRASFWRQ----FHKLIGATDIVEGSVGLVANIGTGFYDLFYEPIDGLLDSNSSFLNGLSKGGKSLASRAIGGTSAFTSTITGGIGKGVSLLTLDSDFQRNRSLRRFNKTTSVSEGLMVGTQELGKNIMEGVTGIVV 2838          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: H3HCA5_PHYRM (Mannosyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCA5_PHYRM)

HSP 1 Score: 154 bits (390), Expect = 1.080e-39
Identity = 79/182 (43.41%), Postives = 115/182 (63.19%), Query Frame = 0
Query:   31 IAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            +  LDNA + LNAL +EHAFG  G     + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y++ R R R      + + + QG+KE   GV++GV G+++      Q  G++
Sbjct:  859 VPDLDNAPVRLNALMIEHAFGTSGDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKIGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQNRARARRRHVRGLREGLVQGSKELSLGVYEGVAGLVLNPMRGAQESGAV 1036          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A3R7JGP2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JGP2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.660e-39
Identity = 79/182 (43.41%), Postives = 114/182 (62.64%), Query Frame = 0
Query:   31 IAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            +  LDNA + LNAL +EHAFG        + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y+  R R R      + + + QG+KE   GV++GVTG+++      Q  G++
Sbjct:  744 VPDLDNAPVRLNALMIEHAFGTSSDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKIGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQHNRARARRRHVRGLREGLVQGSKELSLGVYEGVTGLVLNPMRGAQESGAV 921          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A3F2RL93_9STRA (Mannosyltransferase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RL93_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.730e-39
Identity = 79/182 (43.41%), Postives = 114/182 (62.64%), Query Frame = 0
Query:   31 IAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            +  LDNA + LNAL +EHAFG        + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y+  R R R      + + + QG+KE   GV++GVTG+++      Q  G++
Sbjct:  837 VPDLDNAPVRLNALMIEHAFGTSSDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKIGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQHNRARARRRHVRGLREGLVQGSKELSLGVYEGVTGLVLNPMRGAQESGAV 1014          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A6A3U5U2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U5U2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.840e-39
Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 0
Query:   11 TYRSTPGSEVQDAEELTLSTIAQ----LDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            ++  T G E   A    + ++      LDNA + LNAL +EHAFG  G     + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y++ R R R      + + + QG++E   GV++GV G+++      Q  G++
Sbjct: 3303 SFGETSGDESSSAMTWAIPSLTMHVPDLDNAPVRLNALMIEHAFGTSGDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKIGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQHRARARRRHVRGVREGLVQGSRELSLGVYEGVAGLVLNPMRGAQESGAV 3504          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A662Y4Z9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4Z9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 7.220e-39
Identity = 77/182 (42.31%), Postives = 115/182 (63.19%), Query Frame = 0
Query:   31 IAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            +  LDNA + LNAL +EHAFG        + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y+++R R R      + + + QG++E   GV++GV G+++      Q  G++
Sbjct: 3848 VPDLDNAPVRLNALMIEHAFGTSSDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKVGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQIRARARRRHVRGLREGLVQGSRELSLGVYEGVAGLVLNPMRGAQEGGAV 4025          
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Match: A0A662YB47_9STRA (PH domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YB47_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.750e-38
Identity = 76/182 (41.76%), Postives = 115/182 (63.19%), Query Frame = 0
Query:   31 IAQLDNARLCLNALQLEHAFGGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGVKDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGDTISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIMQVQLSPQLHGSL 212
            +  LDNA + L+AL +EHAFG        + K+Y      Q  + +H ++GSFDFLG+PVG L ++ TGV+DF YEPLEGLK  GKGF  GL KG  SL++NT+ GTF+  +K++G+ G   ++LSLD  Y+++R R R      + + + QG++E   GV++GV G+++      Q  G++
Sbjct:  127 VPDLDNAPVRLSALMIEHAFGTSSDLTRRVSKYYTR----QLWKQLHKILGSFDFLGNPVGFLDHIGTGVRDFVYEPLEGLKVGGKGFSKGLAKGTASLMTNTVDGTFDAASKISGTFGQGFANLSLDDHYQQIRARARRHHVRGLREGLVQGSRELSLGVYEGVAGLVLNPMRGAQEGGAV 304          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55399.12955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LME1_ECTSI5.920e-11885.85Similarities to vacuolar protein sorting-associate... [more]
A0A6H5K0E6_9PHAE6.860e-11185.38PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A835ZA73_9STRA1.710e-6056.67PH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A482SSP7_9ARCH8.010e-4239.50Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
H3HCA5_PHYRM1.080e-3943.41Mannosyltransferase n=1 Tax=Phytophthora ramorum T... [more]
A0A3R7JGP2_9STRA2.660e-3943.41Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A3F2RL93_9STRA2.730e-3943.41Mannosyltransferase n=1 Tax=Phytophthora kernoviae... [more]
A0A6A3U5U2_9STRA2.840e-3939.81Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A662Y4Z9_9STRA7.220e-3942.31Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662YB47_9STRA2.750e-3841.76PH domain-containing protein n=1 Tax=Nothophytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 1..162
e-value: 6.2E-40
score: 136.9
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 2..200
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 2..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55399contigH-elongata_contig55399:478..3658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55399.12955.1mRNA_H-elongata_contig55399.12955.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55399 454..3658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55399.12955.1 ID=prot_H-elongata_contig55399.12955.1|Name=mRNA_H-elongata_contig55399.12955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
MHLHPLDVRVTYRSTPGSEVQDAEELTLSTIAQLDNARLCLNALQLEHAF
GGRGVFAEVILKHYKMAFLTQASRGVHNVVGSFDFLGDPVGLLSNLSTGV
KDFFYEPLEGLKPDGKGFLYGLGKGGTSLVSNTMQGTFNTFNKVTGSLGD
TISHLSLDTDYRKMRVRERLVQGETMADSMAQGAKEFGRGVFQGVTGVIM
QVQLSPQLHGSLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13