prot_H-elongata_contig55349.12953.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55349.12953.1
Unique Nameprot_H-elongata_contig55349.12953.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 2.980e-52
Identity = 92/170 (54.12%), Postives = 114/170 (67.06%), Query Frame = 0
Query:    2 DRTGGNGPDLLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSE-DDDAQRSGAKSEPSFKR--GKLWRLYDLKSWHLSCRIYEEFATDLFELE 168
            D+ G    DL+ HF  LERVVLTAN NLQR+ISSYYN+ VT+DV  C EV P +Y+R+V + VLG  FCVAKS+V++H P   +A KTG + LGQLF + +I PRFELL AGR     +    ++   G + E    R  G  WRLYDL+S H+SCRIYEEF  DLF LE
Sbjct:  159 DKDGRREEDLIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE 328          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.120e-40
Identity = 78/168 (46.43%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    2 DRTGGN--GPDLLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFEL 167
            D  GG    P +L  F+P+ERVVLTANGNLQRIISSYYNA V + +  C+     +YER V L V G +FC AKS+V+LHS    +A +T ++ +GQLF+     P F LL  G+     S   D   S     P+     +WR+YDL+S HLSCRI E+FA +LF++
Sbjct:  108 DIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGAS-----PTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: W7TDI1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.850e-31
Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 0
Query:   15 FSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQ----RSGAKSEPSFKRGKLWRLYDLKS-WHLSCRIYEEFATDLFE 166
            FSPLERV L+A G+LQRIISSY+N+AVT+ +K C E++P +++R+V L V+G  FC A S +   +P      +  ++ LGQLF+   + P F LL  GRT VE  E+ D +    R G         G  WR+Y+L     ++CRI E F+++ F+
Sbjct:  129 FSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQLFRHLRVYPTFRLLDVGRTEVEDGEERDVEGLREREGG--------GGFWRVYELDCPGMINCRILERFSSNTFQ 277          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A7S2L0C0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L0C0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.280e-27
Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   15 FSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPF-------IYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFEL 167
            FS L+R+ LTANGNLQRI+SS+Y++ VT+ V  C E           +++R V L V  + FC A S + +H PM  +  ++G + LGQLF+     P F+LL AGRT                     + G +WRLY+LKS  L+C I+E+F+ D++ +
Sbjct:  162 FSALDRIALTANGNLQRIVSSFYDSPVTVVVNSCVERPRLCASENAGVWDRSVDLKVYNKRFCRATSEITVHEPMCAELVRSGEVGLGQLFRYLDKLPTFDLLDAGRT---------------------ESGGMWRLYELKSKELTCSIFEDFSPDVWSM 300          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A1Z5JUV1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUV1_FISSO)

HSP 1 Score: 107 bits (267), Expect = 2.200e-26
Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    4 TGGNGPDLLRHF---SPLERVVLTANGNLQRIISSYYNAAVTIDVKHCE--EVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFELEDR 170
            T GN   L   F   +PL+R+VLTANGNLQR+I+SYY+A V++ V+ C   +  P +++R V L VLG EFC A+S V +     ++   +G + LGQLF+  ++ P F L +AG   +                     G +WR Y L+   L+C+I EEF   L+EL+ R
Sbjct:   17 TSGNATTLATAFGLTNPLDRLVLTANGNLQRLIASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFLREAGVDPI--------------------TGGIWREYTLQCDALTCQIREEFIPGLWELDHR 168          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A7S1C1D9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1D9_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.160e-26
Identity = 70/185 (37.84%), Postives = 96/185 (51.89%), Query Frame = 0
Query:    3 RTGGNGPD---------LLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEE--------VQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTT---VELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFEL 167
            RTG +G +         L+   SPL+R+ LTANGNLQRI+SS+Y+A V++ V   EE        V   +++R VAL+V    FC A SVV +H        ++G + LGQLF+     P+FEL+ AGRT    V+   DD+              G+LWR Y L    L C I EEF  D + +
Sbjct:   31 RTGASGGEGRRSRRRDALVAALSPLDRIALTANGNLQRIVSSFYDAPVSVVVVRNEERASAASRRVPSAVWDRSVALVVHDTTFCRAASVVTVHDAGCAALVRSGKIGLGQLFRHLDRLPKFELVDAGRTRSIGVDGGADDE--------------GRLWRRYRLWCDELECDILEEFVADTWSI 201          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A0L0HN02_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN02_SPIPD)

HSP 1 Score: 105 bits (261), Expect = 4.940e-25
Identity = 59/163 (36.20%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   15 FSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQP---------FIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFELE 168
            FSP+ER++LTANGN+QRI+S+YYN+ V++D+ H E +            ++ R+V L  L +  C AKS V +  P   +      + +GQLF+  +I P FELL+ GRT                          WR YDL+S  ++CRI EEF   +F L+
Sbjct:   50 FSPMERILLTANGNVQRILSAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGRTV----------------------NSFWREYDLRSNGVNCRIREEFPLGVFNLQ 190          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A7S3WYK2_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WYK2_9SPIT)

HSP 1 Score: 107 bits (266), Expect = 1.960e-24
Identity = 64/164 (39.02%), Postives = 87/164 (53.05%), Query Frame = 0
Query:    7 NGPDLLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGK--LWRLYDLKSWHLSCRIYEEFATDLFELE 168
            NG   LR F PL RVV+TANGNLQR+ISSY+N  V +   H  +V    +ER+V L+  G EF VA S V +      +A  TG +A+GQLF+  +I P FELL AG                      ++ G+   WR Y L    + C+I+E   +D+F L+
Sbjct:   31 NGSPALRDFEPLHRVVVTANGNLQRLISSYHNTRVEVRQVHSRQVAEGRFEREVVLVCFGVEFAVATSTVEISRADCLEAITTGGVAIGQLFRHLNILPVFELLGAG----------------------YEHGRQHFWRDYLLSGEGIHCKIHERIRSDVFALK 172          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A8J5XQW5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQW5_DIALT)

HSP 1 Score: 102 bits (254), Expect = 8.290e-23
Identity = 67/167 (40.12%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    3 RTGGNGPDLLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEV--QPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFEL 167
            RT      L   FSP ER+VLTANGNLQR+ISSYYN+ V++ VK   +V      YER+V L VLG  F  A S V+L       A +   +ALGQLF+ F + P FELL+A +                + + SF+R      Y L++  ++C I E F   LF L
Sbjct:   14 RTSAPASQLPSGFSPEERIVLTANGNLQRLISSYYNSTVSVAVKRNAKVAGSDGHYEREVELSVLGVAFATASSAVVLSVDRLVDAVENHGVALGQLFRHFELLPTFELLRASK----------------RPDGSFERA-----YTLRATGITCTIVERFVPGLFTL 159          
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Match: A0A813DD16_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DD16_POLGL)

HSP 1 Score: 102 bits (255), Expect = 8.340e-23
Identity = 61/153 (39.87%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   15 FSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEEVQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQAFHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSWHLSCRIYEEFATDLFEL 167
            FSPL+R VL ANGNLQRI+SSY+++ VT+ V+         YER+V L V G  F V  S V+L +    +A +   + +GQLF+  +I P F LL+AG+      E      SG ++  S    + WR Y L    + C I E   +DLFEL
Sbjct:   55 FSPLQRTVLFANGNLQRILSSYHDSPVTVTVRFNRRKAHGSYEREVDLSVFGCIFAVCTSSVVLTTEECIRAIEVDGVGIGQLFRHLNIMPAFSLLQAGQLAAAAEESPTT--SGPQALDS--EARFWREYQLSGLGVQCTIREVLRSDLFEL 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55349.12953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ28_9PHAE2.980e-5254.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YNG4_9STRA5.120e-4046.43Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
W7TDI1_9STRA1.850e-3141.40Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2L0C0_9STRA1.280e-2738.13Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5JUV1_FISSO2.200e-2637.79Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S1C1D9_9STRA5.160e-2637.84Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0L0HN02_SPIPD4.940e-2536.20Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7S3WYK2_9SPIT1.960e-2439.02Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A8J5XQW5_DIALT8.290e-2340.12Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A813DD16_POLGL8.340e-2339.87Hypothetical protein n=2 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028978Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamilyGENE3D3.40.1410.10coord: 14..170
e-value: 8.6E-9
score: 37.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55349contigH-elongata_contig55349:2295..3585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55349.12953.1mRNA_H-elongata_contig55349.12953.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55349 2234..3855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55349.12953.1 ID=prot_H-elongata_contig55349.12953.1|Name=mRNA_H-elongata_contig55349.12953.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
MDRTGGNGPDLLRHFSPLERVVLTANGNLQRIISSYYNAAVTIDVKHCEE
VQPFIYERDVALMVLGREFCVAKSVVILHSPMSRKAFKTGTLALGQLFQA
FHIRPRFELLKAGRTTVELSEDDDAQRSGAKSEPSFKRGKLWRLYDLKSW
HLSCRIYEEFATDLFELEDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028978Chorismate_lyase_/UTRA_dom_sf