prot_H-elongata_contig55339.12949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55339.12949.1
Unique Nameprot_H-elongata_contig55339.12949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length251
Homology
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: D8LRX5_ECTSI (LigB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX5_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 7.320e-110
Identity = 151/251 (60.16%), Postives = 185/251 (73.71%), Query Frame = 0
Query:    1 MDEDSAVVEWYRTFTKEWPKPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEMSMASMAFW 251
            +D  SA  +WYRTFTK+W KPSAIVV+SAHWEGRG+V+VT G KHPLF+DYYGFP + Y L Y  PG P LA RI+ LL   G  ARG+ SRGYDHG F+PLKLMYPDAD+PVVQVSLL GLD E+HLK+G+ LK L+ + ++L++GSGQ+TH   +    Y   K    E  F  WLKETA  P + P+ER+RRL EWE+ AP+ R AHPREEHLLPLHV +  TGF PG +I+D+F  G MS+A + FW
Sbjct:    4 IDATSAAAQWYRTFTKKWAKPSAIVVVSAHWEGRGAVKVTTGEKHPLFFDYYGFPDYCYDLEYAPPGHPELARRIIELLEADGFNARGDDSRGYDHGTFIPLKLMYPDADVPVVQVSLLGGLDPEKHLKMGKTLKKLVDERDVLIVGSGQATHGRGSDHRPYPPGKGAPKEEAFVDWLKETAASPAVTPEERQRRLREWERDAPHGRNAHPREEHLLPLHVAAGCTGFQPGSIIFDDFAMGHMSLACVGFW 254          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: A0A1J4QGR4_9GAMM (Dioxygenase n=1 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QGR4_9GAMM)

HSP 1 Score: 223 bits (568), Expect = 2.990e-69
Identity = 116/221 (52.49%), Postives = 147/221 (66.52%), Query Frame = 0
Query:    7 VVEWYRTFTKEWPKPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTG 227
            +V+W +       +P AI+++SAHWE      +TAGA+  L YDYYGFP  +Y++ Y CPGEPALA ++   L  AG+PAR +  RG+DHGVFVPLKLMYP+ADIP VQ+SL++ LD E+HL IG AL+ L  D N+LVIGSG S HN  A     T     R +  F AWL++T  +P L   ERRRRL+ W+  AP+AR  HPREEHLLPLHV     G
Sbjct:   28 MVQWLQDMAGRLRRPEAILIVSAHWEAAVPT-ITAGARPGLIYDYYGFPPESYEIQYPCPGEPALAQQVQQALMAAGMPARLDAERGFDHGVFVPLKLMYPEADIPCVQLSLVSSLDAEQHLNIGRALQALDYD-NLLVIGSGFSFHNMQAFFTPGTPEIKARNQA-FEAWLEDTCGNPRLEEAERRRRLIHWDS-APHARFCHPREEHLLPLHVCYGLAG 244          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: A0A836CEX8_9STRA (Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.610e-69
Identity = 120/254 (47.24%), Postives = 159/254 (62.60%), Query Frame = 0
Query:    1 MDEDSAVVEWYRTFTKEWPKPSAIVVISAHWEGRG-SVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVE---FAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEMSMASMAF 250
            +D++S V   +R  +   PKP  IV+ +AHWE  G  +RVT      L YDYYGFP  TY+L+Y  PG+P LA  I+ LL+ AG+ A  E  RG+DHGVF+PLK++YPDAD+PVV +SL + LD   H+ +G+AL  L     +LV GSG +THN     ++    + + +E     F  WLK T  D  +  QER RRLL W + AP+AR +HPREEHLLPLHV +   GF+ G ++ D  V G MSMAS AF
Sbjct:   36 IDKNSRVAADFRKLSTVLPKPKVIVICTAHWEADGPKIRVTGQPAPSLVYDYYGFPAETYKLTYPAPGDPQLAADIVALLKGAGISAELELERGFDHGVFIPLKMIYPDADVPVVAISLSSTLDPAFHISVGKALSGLA-GRGVLVFGSGMATHNLGMVRSAAAHGEGVPVEPRAGAFIDWLKATLGDG-VSAQERERRLLRWTEEAPHARHSHPREEHLLPLHVAAGAAGFAAGELVLDATVFGGMSMASFAF 287          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: UPI001F2DEB7A (dioxygenase n=2 Tax=unclassified Microbulbifer TaxID=2619833 RepID=UPI001F2DEB7A)

HSP 1 Score: 222 bits (566), Expect = 7.930e-69
Identity = 116/208 (55.77%), Postives = 143/208 (68.75%), Query Frame = 0
Query:   20 KPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTG 227
            +PSAI+VISAHWE +    +TAGA+ PL YDY+GFP   Y + Y CPGEPALA ++   L++AG+PAR ++ RG+DHG+FVPLKLMYP+ADIP VQ+SL+  LD  EHL IG AL+ L  D N+LV+GSG S HN  A          +R  + F  WL ET TDP +P   R  RLL WE+ AP+AR  HPREEHLLPLHV    TG
Sbjct:   50 RPSAILVISAHWE-QSVPTITAGARPPLIYDYHGFPEEAYDIQYPCPGEPALAGQVHQALKQAGIPARLDQQRGFDHGLFVPLKLMYPEADIPCVQLSLVNSLDAGEHLAIGRALRALDYD-NLLVVGSGFSFHNMQAFFAPDNPEIQVR-NLAFEDWLHETCTDPTIPESRRTERLLHWER-APHARFCHPREEHLLPLHVCYGLTG 253          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: UPI001247FA37 (dioxygenase n=1 Tax=Marinobacter TaxID=2742 RepID=UPI001247FA37)

HSP 1 Score: 220 bits (560), Expect = 4.690e-68
Identity = 114/202 (56.44%), Postives = 142/202 (70.30%), Query Frame = 0
Query:   20 KPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHV 221
            KPSAI+VISAHWE      +TAGAK PL YDYYGFP   Y++ Y CPGEPALA ++   L +AG+P R ++ RG+DHG+FVPLKLMYPDADIP +Q+SL++ LD   HL IG AL+ L  D N+LVIGSG   HN  A  +  T     R +  F  WL++T  D +LP  ER +RL++WE+ AP+AR  HPREEHLLPLHV
Sbjct:   41 KPSAILVISAHWE-ESVPTITAGAKPPLIYDYYGFPPEAYEIEYPCPGEPALAQQVYQALDQAGIPVRLDEQRGFDHGLFVPLKLMYPDADIPCIQLSLVSSLDAGTHLAIGRALQALDYD-NLLVIGSGFLFHNMRAFFSKQTPDIQARNQA-FEEWLEQTCGDTNLPESERAKRLVDWER-APHARFCHPREEHLLPLHV 238          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: UPI001402F277 (dioxygenase n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001402F277)

HSP 1 Score: 219 bits (558), Expect = 9.710e-68
Identity = 120/234 (51.28%), Postives = 154/234 (65.81%), Query Frame = 0
Query:   20 KPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEM--SMASMAFW 251
            KPSAI+VISAHWE      +TAGA   L YDYYGFP  +Y++ Y  PGEPALA +I   L  AGLPAR ++ RG+DHG+FVPLKLMYPDADIP VQ+SL+  LD E HL +G AL++L   EN+LVIGSG S HN  A  ++ +     R +  F AWL+ET +DP +P  +R  RL  W++ AP+AR  HPREEHL+PLHV     G +      DE +  ++   M+ M +W
Sbjct:   41 KPSAILVISAHWE-EAVPTITAGAHPSLIYDYYGFPPESYEIQYPSPGEPALAGQIAAALERAGLPARLDRERGFDHGLFVPLKLMYPDADIPCVQLSLVNTLDAETHLAMGRALQSL-DYENLLVIGSGFSFHNMRAFYSAVSSDDEARNQA-FEAWLEETCSDPAMPESQREDRLAHWDQ-APHARFCHPREEHLMPLHVCYGLAGKAS-----DEHLSAQILGKMSGMYYW 265          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: A0A7T1Y7Q8_9GAMM (Dioxygenase n=2 Tax=Halomonadaceae TaxID=28256 RepID=A0A7T1Y7Q8_9GAMM)

HSP 1 Score: 217 bits (553), Expect = 3.160e-67
Identity = 122/232 (52.59%), Postives = 150/232 (64.66%), Query Frame = 0
Query:   20 KPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEMSMASMAFW 251
            +PSAI+VISAHWE      +TAGA   L YDYYGFP  +Y++ Y CPGEPALA +I   LR+AGLPAR ++ RG+DHG+FVPLKLMYP+ADIP VQ+SL+  LD   HL IG AL+ L  D+ +LVIGSG S HN  A     T     R +  F AWL+ET +D  L   +R  RLL+WE+ AP+AR  HPREEHLLPLHV     G  P        + G+ S   M +W
Sbjct:   25 RPSAILVISAHWEAAVPT-ITAGANPALIYDYYGFPPESYEIEYPCPGEPALARQIHQALRQAGLPARLDEHRGFDHGLFVPLKLMYPEADIPCVQLSLVDSLDAATHLAIGRALRALEVDD-LLVIGSGFSFHNMQAFFAPATPELDARNQA-FEAWLEETCSDARLTEAQRTERLLQWER-APHARFCHPREEHLLPLHVCYGLAG-QPSETHVSATILGKRS--GMFYW 249          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: A0A3N5ITC8_9BACT (Dioxygenase n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3N5ITC8_9BACT)

HSP 1 Score: 216 bits (550), Expect = 7.670e-67
Identity = 118/242 (48.76%), Postives = 157/242 (64.88%), Query Frame = 0
Query:    7 VVEWYRTFTKEWPKPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVE--FAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEMSMA 246
            +V++ ++ T E+  P+AI+V+SAHWE R +  +T+G+   LFYDYYGFP   Y++ Y  PG+PALAD I  LL+E    AR +  RG+DHG+FVPLK+MYPDA IP VQ+SL+ GL  E H+++G+AL  L Q +N+L++GSG S HN  A    +  R  M+      F  WL +T TD HL  QER  RL+ WE  AP AR  HPREEHLLPLHV     G +   V Y+E + G+ S A
Sbjct:   12 MVQFLQSITSEFEPPAAILVVSAHWEARRTT-ITSGSSPALFYDYYGFPDEAYKIQYPAPGDPALADLIFQLLQEHEFDARLDAERGFDHGLFVPLKIMYPDAHIPCVQLSLVQGLAAETHIRVGKALSALRQ-KNVLILGSGFSFHNMQA----FMSRGGMQDSKNDAFQKWLIDTCTDLHLSEQERESRLVHWES-APFARYCHPREEHLLPLHVCYGIAGTAAKLVFYEEIL-GKKSCA 245          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: A0A2D9ZYQ0_9GAMM (Dioxygenase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2D9ZYQ0_9GAMM)

HSP 1 Score: 216 bits (551), Expect = 9.790e-67
Identity = 117/230 (50.87%), Postives = 147/230 (63.91%), Query Frame = 0
Query:    7 VVEWYRTFTKEWPKPSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYD 236
            +V+       E  KP AI+V+SAHWE      VT  A   LFYDYYGFP  +Y + Y CPGEP LA +++ +L  AG+PA+ +  RG DHGVFVPLKL+YP+ADIP +Q+SL  GLD  EH++IGEAL+ L  D N+L+IGSG S HN  A     T  +  +M   FA WL +T  D  LP  ER +RL+EWEK AP AR  HPREEHL+PL V     G +  + IYD
Sbjct:   27 MVQCLTAMNGELRKPDAILVVSAHWEATIPT-VTTAANPSLFYDYYGFPEESYHIQYPCPGEPELAQQVMDVLTVAGIPAKSDGQRGLDHGVFVPLKLLYPEADIPTIQLSLKKGLDAAEHIRIGEALRGLNYD-NLLIIGSGFSFHNMRAFFTPETP-EIRQMNQAFAEWLNQTCGDTALPESERAQRLIEWEK-APAARFNHPREEHLIPLMVCYGLAGRASSK-IYD 251          
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Match: UPI001F2A0FB6 (dioxygenase n=1 Tax=Microbulbifer sp. TT37 TaxID=2904250 RepID=UPI001F2A0FB6)

HSP 1 Score: 216 bits (551), Expect = 1.140e-66
Identity = 118/211 (55.92%), Postives = 140/211 (66.35%), Query Frame = 0
Query:   21 PSAIVVISAHWEGRGSVRVTAGAKHPLFYDYYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFVPLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQSTHN----FSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWEKVAPNARVAHPREEHLLPLHVVSAYTG 227
            PSAI+VISAHWE +    +TAGA  PL YDY+GFP   Y + Y CPGEPALA ++  +L EAG+PAR +  RG+DHG+FVPLKLMYPDADIP VQ+SL+  LD  EHL IG AL+ L  D N+LVIGSG S HN    F+  S     R      + F  WL ET TDP +P  +R  RL  WE+ AP+AR  HPREEHLLPLHV     G
Sbjct:   43 PSAILVISAHWE-QPVPTITAGANPPLIYDYHGFPPEAYDIQYPCPGEPALAGQVHQVLEEAGIPARLDHQRGFDHGLFVPLKLMYPDADIPCVQLSLVNSLDAGEHLAIGRALQALDYD-NLLVIGSGFSFHNMRAFFAPDSPGIQARN-----LAFEDWLHETCTDPTMPEPQRAERLAHWER-APHARFCHPREEHLLPLHVCYGLAG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55339.12949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRX5_ECTSI7.320e-11060.16LigB domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1J4QGR4_9GAMM2.990e-6952.49Dioxygenase n=1 Tax=Oceanisphaera psychrotolerans ... [more]
A0A836CEX8_9STRA7.610e-6947.24Catalytic LigB subunit of aromatic ring-opening di... [more]
UPI001F2DEB7A7.930e-6955.77dioxygenase n=2 Tax=unclassified Microbulbifer Tax... [more]
UPI001247FA374.690e-6856.44dioxygenase n=1 Tax=Marinobacter TaxID=2742 RepID=... [more]
UPI001402F2779.710e-6851.28dioxygenase n=2 Tax=Marinobacter TaxID=2742 RepID=... [more]
A0A7T1Y7Q8_9GAMM3.160e-6752.59Dioxygenase n=2 Tax=Halomonadaceae TaxID=28256 Rep... [more]
A0A3N5ITC8_9BACT7.670e-6748.76Dioxygenase n=1 Tax=Calditrichaeota bacterium TaxI... [more]
A0A2D9ZYQ0_9GAMM9.790e-6750.87Dioxygenase n=1 Tax=Oceanospirillaceae bacterium T... [more]
UPI001F2A0FB61.140e-6655.92dioxygenase n=1 Tax=Microbulbifer sp. TT37 TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014436Extradiol aromatic ring-opening dioxygenase, DODA-typePIRSFPIRSF006157Doxgns_DODAcoord: 1..251
e-value: 8.1E-74
score: 244.4
NoneNo IPR availableGENE3D3.40.830.10coord: 1..251
e-value: 3.3E-78
score: 264.3
NoneNo IPR availablePANTHERPTHR30096UNCHARACTERIZEDcoord: 7..250
NoneNo IPR availableSUPERFAMILY53213LigB-likecoord: 3..250
IPR004183Extradiol ring-cleavage dioxygenase, class III enzyme, subunit BPFAMPF02900LigBcoord: 4..250
e-value: 1.4E-39
score: 135.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55339contigH-elongata_contig55339:477..2835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55339.12949.1mRNA_H-elongata_contig55339.12949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55339 477..2835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55339.12949.1 ID=prot_H-elongata_contig55339.12949.1|Name=mRNA_H-elongata_contig55339.12949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=251bp
MDEDSAVVEWYRTFTKEWPKPSAIVVISAHWEGRGSVRVTAGAKHPLFYD
YYGFPRHTYQLSYDCPGEPALADRILGLLREAGLPARGEKSRGYDHGVFV
PLKLMYPDADIPVVQVSLLAGLDEEEHLKIGEALKTLLQDENILVIGSGQ
STHNFSASSNSYTRRKYMRMEVEFAAWLKETATDPHLPPQERRRRLLEWE
KVAPNARVAHPREEHLLPLHVVSAYTGFSPGRVIYDEFVPGEMSMASMAF
W
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014436Extradiol_dOase_DODA
IPR004183Xdiol_dOase_suB