prot_H-elongata_contig55321.12948.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55321.12948.1
Unique Nameprot_H-elongata_contig55321.12948.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length154
Homology
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: D7FU98_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU98_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.100e-55
Identity = 101/156 (64.74%), Postives = 120/156 (76.92%), Query Frame = 0
Query:    1 GPGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQNVAKASSVKTGKASKSGNTSSGSSPPPAPSSTPF---REGETSTKDRSRRALDADLIESVVIDVDGD 153
            GPGTQQLSR+AKLAISVLIDLIG+SSY +PG+GE +D+GWAPISSALIFYLYGNSIFAGLAFVEEILPG D IPTATIAWFLTNSE+GQNV  A++ K  +    G+ SS + PPPA S  PF    +   + K    R +D  +++S VIDVD +
Sbjct:   19 GPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPE----GDVSSSAPPPPAGS--PFSKLNDAREAGKGAGSRKVDDGMVQSGVIDVDSE 168          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A7S3ZL34_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZL34_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.670e-35
Identity = 58/91 (63.74%), Postives = 74/91 (81.32%), Query Frame = 0
Query:    1 GPGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQNV 91
            G G  +L+R+ KL +S+LIDLIG+S+Y +P  GE +DVGWAP+S+ALIF+LYG+ IFA   F EEILPGLDF+PTATIAWFLT S+ GQ +
Sbjct:   44 GGGASELTREGKLIVSILIDLIGMSTYLLPVAGEGADVGWAPVSAALIFWLYGSGIFAAAGFAEEILPGLDFVPTATIAWFLTQSDAGQRI 134          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: R1CZS3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZS3_EMIHU)

HSP 1 Score: 116 bits (291), Expect = 5.990e-30
Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = 0
Query:    1 GPGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQNVAKAS 95
            GP  ++L    KL +S+LIDL+GV+SY VP  GE +D+ WAP+S+ L+ YLYGNSI  GLAF EE+LPGLD +PTATI W L N+E+G++V +AS
Sbjct:   74 GPDNERL---IKLLVSILIDLVGVASYAVPLAGEGADLAWAPVSALLVNYLYGNSILTGLAFAEEVLPGLDVVPTATIGWLLENTELGRSVNEAS 165          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A7S2RIK8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIK8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 6.780e-30
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 GPGTQQ-LSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQ 89
            GPG +   S++ KL +S+L+DL+G+S+Y +PG+GE  D+ WAPIS+ L+ YLYGN+  +GLA VEE+LPGLDFIPTATIAWF+T   V +
Sbjct:   65 GPGGEAGASKETKLLLSLLVDLVGMSTYALPGVGEAGDIAWAPISAILVQYLYGNAALSGLALVEELLPGLDFIPTATIAWFITYGTVSE 154          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A7S4E380_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E380_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.080e-28
Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    1 GPGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIA 79
            G G  +L+R+ KL +S+LIDLIG+S+Y +P  GE +DVGWAP+S+ALIF+LYG+ IFA   F EEILPGLDF+PTATIA
Sbjct:   44 GGGASELTREGKLIVSILIDLIGMSTYLLPVAGEGADVGWAPVSAALIFWLYGSGIFAAAGFAEEILPGLDFVPTATIA 122          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A7S3AG80_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG80_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 4.480e-28
Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 0
Query:    5 QQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQN 90
            +Q ++  KL IS+LIDLIG+++Y  P +GE  D+ WAPIS+ LI  LYGN++  GLAF EE+LPGLD IPTATIAW L N+E GQN
Sbjct:   65 EQQAKLGKLLISLLIDLIGMATYVFPLVGETGDLAWAPISALLINQLYGNALITGLAFAEELLPGLDIIPTATIAWVLENTEFGQN 150          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A6U9ZMF8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZMF8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.440e-28
Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query:    2 PGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNS 85
            PG   +    KL + +LID IGV+S+  PGLGE +DVGWAPIS+ L+ YL+GN +F  LA VEE+ PG DF+PTATIAWFL NS
Sbjct:  107 PGGADMDPGLKLLVCILIDFIGVASFAAPGLGEATDVGWAPISAFLVNYLFGNGLFTALALVEELSPGFDFVPTATIAWFLENS 190          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A7S2CFZ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFZ0_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.010e-26
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    4 TQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTN 84
            TQ+  +  KL +S+LID +G +S+ +PGLGE +D+GWAPIS  LI +LYGNS+ +GL FVEEILPG DFIPTATI     N
Sbjct:   68 TQEQEKAVKLLLSLLIDFVGYASFALPGLGEATDIGWAPISGILIQFLYGNSLLSGLGFVEEILPGFDFIPTATIGTLSCN 148          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: A0A448ZPQ8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPQ8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.440e-26
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0
Query:   12 KLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNS 85
            KL + +LID IGV+S+  PGLGE +D GWAPIS+ L+ YL+GN +F  LA VEE+ PGLDF+PTATIAWFL N+
Sbjct:  128 KLLVCLLIDFIGVASFAAPGLGEATDAGWAPISALLVNYLFGNGLFTALALVEELSPGLDFVPTATIAWFLENA 201          
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Match: F0YF75_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YF75_AURAN)

HSP 1 Score: 102 bits (255), Expect = 5.800e-26
Identity = 44/70 (62.86%), Postives = 55/70 (78.57%), Query Frame = 0
Query:   12 KLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFYLYGNSIFAGLAFVEEILPGLDFIPTATIAWF 81
            KL + V IDL+G S+Y +P +GE  DVGWAP+ +AL+ YL+GN +  G AF+EEILPG DFIPTATIAWF
Sbjct:    3 KLILCVAIDLVGASTYAIPAIGEGFDVGWAPVQAALVNYLFGNGLITGFAFLEEILPGTDFIPTATIAWF 72          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55321.12948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU98_ECTSI1.100e-5564.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3ZL34_9STRA1.670e-3563.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
R1CZS3_EMIHU5.990e-3057.89Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S2RIK8_9STRA6.780e-3057.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4E380_9STRA3.080e-2864.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3AG80_9EUKA4.480e-2860.47Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A6U9ZMF8_9STRA7.440e-2859.52Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2CFZ0_9STRA3.010e-2659.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448ZPQ8_9STRA4.440e-2663.51Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
F0YF75_AURAN5.800e-2662.86Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55321contigH-elongata_contig55321:211..2969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55321.12948.1mRNA_H-elongata_contig55321.12948.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55321 211..2969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55321.12948.1 ID=prot_H-elongata_contig55321.12948.1|Name=mRNA_H-elongata_contig55321.12948.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
GPGTQQLSRKAKLAISVLIDLIGVSSYTVPGLGELSDVGWAPISSALIFY
LYGNSIFAGLAFVEEILPGLDFIPTATIAWFLTNSEVGQNVAKASSVKTG
KASKSGNTSSGSSPPPAPSSTPFREGETSTKDRSRRALDADLIESVVIDV
DGD*
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