prot_H-elongata_contig55304.12945.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig55304.12945.1
Unique Nameprot_H-elongata_contig55304.12945.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
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BLAST of mRNA_H-elongata_contig55304.12945.1 vs. uniprot
Match: D8LRI8_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI8_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 7.130e-43
Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:    1 QIEAGLSAVQLAFLSSAGEEQKRRLLLQCLEYANGDVTQAKRVCTAFCDFRLEEGWSMVLSASELRDPLRSRVHTLTERRDSLGRAMMTFSPGALDITKAPAVAYHKMLCYVLQEV 116
            Q+ AGLS  +L F+ SAG+E+K RLL QCLEYAN D+  A +VC+ FC FRL+EGW +VLSA EL  PLRSRVHTLT  RD  GR ++TFSPG LD+ KAP  AYHKMLCYVLQEV
Sbjct:  587 QLLAGLSKTELEFVESAGDEEKTRLLHQCLEYANYDMAGAIKVCSTFCKFRLQEGWDLVLSAPELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEV 702
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BLAST of mRNA_H-elongata_contig55304.12945.1 vs. uniprot
Match: A0A6H5JJW0_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW0_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 7.710e-43
Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = 0 
Query:    1 QIEAGLSAVQLAFLSSAGEEQKRRLLLQCLEYANGDVTQAKRVCTAFCDFRLEEGWSMVLSASELRDPLRSRVHTLTERRDSLGRAMMTFSPGALDITKAPAVAYHKMLCYVLQEV 116
            Q+ AGLS  +L F+ SAG+E+K RLL QCLEYAN D+  A +VC+ FC FRL+EGW +VLSA EL  PLRSRVHTLT  RD  GR ++TFSPG LD+ KAP  AYHKMLCYVLQEV
Sbjct:  622 QLLAGLSKKELEFVESAGDEEKTRLLQQCLEYANYDMAGAVKVCSTFCKFRLQEGWDLVLSARELETPLRSRVHTLTTNRDRTGRGVLTFSPGKLDMDKAPPAAYHKMLCYVLQEV 737
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig55304.12945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRI8_ECTSI7.130e-4366.38CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJW0_9PHAE7.710e-4366.38CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..123
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig55304contigH-elongata_contig55304:605..3766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig55304.12945.1mRNA_H-elongata_contig55304.12945.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig55304 605..3766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig55304.12945.1 ID=prot_H-elongata_contig55304.12945.1|Name=mRNA_H-elongata_contig55304.12945.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
QIEAGLSAVQLAFLSSAGEEQKRRLLLQCLEYANGDVTQAKRVCTAFCDF
RLEEGWSMVLSASELRDPLRSRVHTLTERRDSLGRAMMTFSPGALDITKA
PAVAYHKMLCYVLQEVRDVLFSS*
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