prot_H-elongata_contig52272.12533.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52272.12533.1
Unique Nameprot_H-elongata_contig52272.12533.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length341
Homology
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BLAST of mRNA_H-elongata_contig52272.12533.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 7.400e-104
Identity = 187/295 (63.39%), Postives = 219/295 (74.24%), Query Frame = 0 
Query:   54 GPVPSMTDDAIKEVIERSLNEEKLARAPVLKAFNSANSSPVKMALIGRVIIPSTKGTSLPKGSNGRDKPRVSRSRVHAVCLVMEERPRASGPSWSCHVKDVTLHPGPEGNEISEITVSTNRHWLMKNLTGVEKRD----KEGAGFTLLFETGRISS-AAVGNESSYTWEGVSPAACDEILWGLLTLHRAARDNDAFEPVNVSLKELDAMAVYHGLASKHPLVPKLARQMRSDGRRESASD-----------LDNGGDGRGMSGVGGRRSSGGGMXXRRASDVSRESVGRIRRSSK 332
            GPVPSMTD A+K++IE SLNEEK ARAP+L+   S N +P+K+ L+GRV+IPS+KG S+P GSNGRDKPR SRSRVH+VC+VME+R  ++G  WS  V+D+T+HPGPEG E +E TV TNR W +K L+GVEKRD     EGA FTL FETGR SS  AVG ESSYTWEGV+ AACDEILWGLLTL+RA ++ D  EPVNVSLKELDA AVYHGLA+KHPLVPKLARQMR+D R  +  D           LD GG G G      RR SG G   RR SD+SR SV + RRSSK
Sbjct:  136 GPVPSMTDAALKDLIETSLNEEKTARAPLLRTSTSPNPTPLKVVLMGRVLIPSSKGASIPTGSNGRDKPRASRSRVHSVCIVMEDRTSSAGSYWSGSVRDITVHPGPEGREFAEKTVVTNRGWNIKGLSGVEKRDGTRETEGAAFTLTFETGRSSSPTAVGQESSYTWEGVNAAACDEILWGLLTLNRAMQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERSRNRGDGGSAANVLGGGLDGGGGGHG------RRPSGTG---RRGSDLSRSSVEKARRSSK 421
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52272.12533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3Y9_ECTSI7.400e-10463.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52272contigH-elongata_contig52272:407..4014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52272.12533.1mRNA_H-elongata_contig52272.12533.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52272 407..4014 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52272.12533.1 ID=prot_H-elongata_contig52272.12533.1|Name=mRNA_H-elongata_contig52272.12533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=341bp
AGDNKDQGGEHRRSSDSAPGAGLDRDANGSRRSGRQSSSKPSRNRRSASK
AKSGPVPSMTDDAIKEVIERSLNEEKLARAPVLKAFNSANSSPVKMALIG
RVIIPSTKGTSLPKGSNGRDKPRVSRSRVHAVCLVMEERPRASGPSWSCH
VKDVTLHPGPEGNEISEITVSTNRHWLMKNLTGVEKRDKEGAGFTLLFET
GRISSAAVGNESSYTWEGVSPAACDEILWGLLTLHRAARDNDAFEPVNVS
LKELDAMAVYHGLASKHPLVPKLARQMRSDGRRESASDLDNGGDGRGMSG
VGGRRSSGGGMGGRRASDVSRESVGRIRRSSKVRVDHPRS*
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