prot_H-elongata_contig51602.12431.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51602.12431.1
Unique Nameprot_H-elongata_contig51602.12431.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length147
Homology
[Close]
BLAST of mRNA_H-elongata_contig51602.12431.1 vs. uniprot
Match: D8LIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR9_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 7.560e-40
Identity = 77/142 (54.23%), Postives = 98/142 (69.01%), Query Frame = 0 
Query:    1 VGLATDFPYHDPSEGPVMEARHQKNEAMQKAHWVHEDMAGCSPQKIDEEKARRERRKKETTEIAERTEGAWKPQRLAAGRSGQKGRGRGLLVPGGVAYPFLVTQEAADFLYSLDLDQEVEAKDEWGVWCRGKVVAVRGDGDW 142
            VGLA DFPYHDP++ PV+EA  ++  A Q      E+M G    +I++E+ARRE+   E T +AE     W+  RLA GR GQ GRGRG+ +PGGVA+PFL+ ++ ADFLYS+    EVE KDEW VWCR KVVAVRG+G W
Sbjct:  609 VGLADDFPYHDPTQLPVLEALRKQTVAYQHHQRNQEEMGGFGLAEIEQERARREKVANEATAVAEAKMKDWEHARLAVGRKGQTGRGRGIPIPGGVAHPFLLDKKTADFLYSVGTGDEVEVKDEWDVWCRAKVVAVRGEGGW 750
[Close]
BLAST of mRNA_H-elongata_contig51602.12431.1 vs. uniprot
Match: A0A6H5J8Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.760e-38
Identity = 77/146 (52.74%), Postives = 99/146 (67.81%), Query Frame = 0 
Query:    1 VGLATDFPYHDPSEGPVMEARHQKNEAMQKAHWVHEDMAGCSPQKIDEEKARRERRKKETTEIAE----RTEGAWKPQRLAAGRSGQKGRGRGLLVPGGVAYPFLVTQEAADFLYSLDLDQEVEAKDEWGVWCRGKVVAVRGDGDW 142
            VGLA DFPYHDP++ PV+EA  ++  A Q      E+M G    +I++E+ARRE+   E T +AE    +    W+  RLA GR GQ GRGRG+ +PGGVA+PFL+ ++ ADFLYS+    EVE KDEW VWCR KVVAVRG+G W
Sbjct:  634 VGLADDFPYHDPTQLPVLEALRKQTVAYQHHQRNQEEMGGFGLAEIEQERARREKAANEATAVAEAKMKQPTKDWEHARLAVGRKGQTGRGRGIPIPGGVAHPFLLDKKTADFLYSVGTGDEVEVKDEWDVWCRAKVVAVRGEGGW 779
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51602.12431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIR9_ECTSI7.560e-4054.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8Y2_9PHAE1.760e-3852.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51602contigH-elongata_contig51602:3539..3979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51602.12431.1mRNA_H-elongata_contig51602.12431.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51602 3539..3979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51602.12431.1 ID=prot_H-elongata_contig51602.12431.1|Name=mRNA_H-elongata_contig51602.12431.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
VGLATDFPYHDPSEGPVMEARHQKNEAMQKAHWVHEDMAGCSPQKIDEEK
ARRERRKKETTEIAERTEGAWKPQRLAAGRSGQKGRGRGLLVPGGVAYPF
LVTQEAADFLYSLDLDQEVEAKDEWGVWCRGKVVAVRGDGDWVSLL*
back to top