prot_H-elongata_contig51451.12408.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51451.12408.1
Unique Nameprot_H-elongata_contig51451.12408.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
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BLAST of mRNA_H-elongata_contig51451.12408.1 vs. uniprot
Match: A0A6H5KTE5_9PHAE (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE5_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.630e-24
Identity = 63/89 (70.79%), Postives = 71/89 (79.78%), Query Frame = 0 
Query:    1 MASRFKRQRAKASKPKP------STPTFDDEDDYLSAAFVVDKPNPPRGKRAREE-DPERGR---VLSKKAIAQKMEERREEGLQQKIG 79
            MASRFKRQRAKA  P        STP F DEDDYLSA+FVV++PN PRGKRA++E DPERGR   V+SKK IA+KME+RREEGLQQKIG
Sbjct:    1 MASRFKRQRAKALNPASAIGAATSTPAFGDEDDYLSASFVVEEPNKPRGKRAQQEADPERGRGESVMSKKDIAKKMEDRREEGLQQKIG 89
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51451.12408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTE5_9PHAE4.630e-2470.79G-patch domain-containing protein n=2 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51451contigH-elongata_contig51451:263..1779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51451.12408.1mRNA_H-elongata_contig51451.12408.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51451 263..1779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51451.12408.1 ID=prot_H-elongata_contig51451.12408.1|Name=mRNA_H-elongata_contig51451.12408.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MASRFKRQRAKASKPKPSTPTFDDEDDYLSAAFVVDKPNPPRGKRAREED
PERGRVLSKKAIAQKMEERREEGLQQKIGK
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