prot_H-elongata_contig5144.12407.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5144.12407.1
Unique Nameprot_H-elongata_contig5144.12407.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length986
Homology
BLAST of mRNA_H-elongata_contig5144.12407.1 vs. uniprot
Match: A0A6H5L8N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8N5_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 9.090e-74
Identity = 172/349 (49.28%), Postives = 216/349 (61.89%), Query Frame = 0
Query:    1 MLERSLSLIHEREAVDITCDSKEECERLAVWIDAKWSVAMIQKSFRGNPRIALALQGRNKTFNDRGLYET-------------LVGVQDEESGNSGPGNGGFGVLPKLDGVKLAKLQDDLLDGVHVTYHDLALGGYYSRSSPRRLRYDCESKEGLIYLEASYEEDGVTIVQNISDLLQVGGGPSAHGPTAGLLRATQG-NPVQREAAVSLVFKNASIDITCGTKQDAHELVLYFSDIGGFKLARTTPRVQRVIRLPP-------LKEKTLDIVA------KAPSERPTPGVIAPEAIGNHRASFVTPFERANVSSAA-EACHRKGASNLSSSTTNGPPSPTFSTRFRAG 321
            +LERSLSL+H+ EAVD+T  SK EC++L  WI AKWSVAM+QKSF+GNPRIA+ALQGRN +   +G Y+                  QDE  G       GFG LPKLD    AKL++DLL+GVHVTYHDL+L GY S S+PRRLRYDC+SK GLIYLEAS+E DG  IV+ +S L+QVGGG SAHGPTA LLRAT G N  QR AAVSLVF   S+DITCG  +DAHELVLYFS++ GF   R  P  + ++   P        +E  + +        +  S R    V A  A   + +   +P    +V  A  ++    GA  ++ + T G   P+FSTRFR+G
Sbjct:  117 ILERSLSLVHKNEAVDMTFASKTECDQLGEWIAAKWSVAMLQKSFKGNPRIAMALQGRNMSMARQGAYDAPKKAGRRGRXXXXXXXXQDEVDG------AGFGRLPKLDAKTKAKLEEDLLNGVHVTYHDLSLRGYISTSTPRRLRYDCQSKAGLIYLEASFEGDGDDIVEPLSSLVQVGGGLSAHGPTASLLRATAGDNNDQRAAAVSLVFSARSMDITCGCVKDAHELVLYFSELKGF--TRAKPSNRSLLGYAPDDAGRQTARESCIGVRGGGNGEHRGESPRQRDDVHAAGAAMLNMSETGSPGTGIDVEDATGQSAPSYGARKMAPAETLGSSVPSFSTRFRSG 457          
BLAST of mRNA_H-elongata_contig5144.12407.1 vs. uniprot
Match: D8LGP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP9_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 8.800e-73
Identity = 185/407 (45.45%), Postives = 231/407 (56.76%), Query Frame = 0
Query:    1 MLERSLSLIHEREAVDITCDSKEECERLAVWIDAKWSVAMIQKSFRGNPRIALALQGRNKTFNDRGLYET-------------LVGVQDEESGNSGPGNGGFGVLPKLDGVKLAKLQDDLLDGVHVTYHDLALGGYYSRSSPRRLRYDCESKEGLIYLEASYEEDGVTIVQNISDLLQVGGGPSAHGPTAGLLRATQG-NPVQREAAVSLVFKNASIDITCGTKQDAHELVLYFSDIGGFKLARTTPRVQRVIRLPPLKEKTLDIVAKAPSERPTPGVIAPEAIGNHRASFVTPFERANVSSAAEACHRK-------------------------GASNLSSSTTNGPPSPTFSTRFRAGIEAIGKDHA--------TQLSASSGFGLDLTRSLSESSSCGSSAIDR 360
            +LERSLSL+H+ EAVD+T  SK EC++L  WI AKWSVAM+QKSF+GNPRIA+ALQGRN +    G Y+                  +DE  G       GFG LPKLD    AKL++DLL GVHVTYHDL+L GY S S+PRRLRYDC+SK GL+YLEAS+E DG  IV+ +S L+QVGGG SAHGPT+ LLRAT G N  QR AAVSLVF   S+DITCG  +DAHELVLYFS++ GF   R  P  + ++   P      D   +  +     GV      G HR   V+P ++ +V +A  A                             GA  +S + T G   P+FSTRFR+G     +            Q SA+SGF  + T SL    S G +A+ R
Sbjct:   58 ILERSLSLVHKNEAVDMTFASKAECDQLGEWIAAKWSVAMLQKSFKGNPRIAMALQGRNISMAREGAYDAPKKTGRRGRXXXXXXXXEDEVDG------AGFGRLPKLDAKTKAKLEEDLLGGVHVTYHDLSLRGYISTSTPRRLRYDCQSKAGLVYLEASFEGDGDDIVEPLSSLVQVGGGLSAHGPTSSLLRATAGDNKEQRAAAVSLVFSARSMDITCGCLKDAHELVLYFSELKGF--TRAKPPDRSMLGYAP------DDAGRQTARESCTGVRG-GGTGGHRG--VSPRQQDDVHAAGAAMLNMSETDGGPPGTGIDVEDATGQSAPSYGARKMSPAETLGSSVPSFSTRFRSGYGGDDRGDGGEGSPGLLRQSSAASGF--NTTASLRGLPSEGEAALHR 445          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5144.12407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8N5_9PHAE9.090e-7449.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGP9_ECTSI8.800e-7345.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5144contigH-elongata_contig5144:2485..10400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5144.12407.1mRNA_H-elongata_contig5144.12407.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5144 327..11728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5144.12407.1 ID=prot_H-elongata_contig5144.12407.1|Name=mRNA_H-elongata_contig5144.12407.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=986bp
MLERSLSLIHEREAVDITCDSKEECERLAVWIDAKWSVAMIQKSFRGNPR
IALALQGRNKTFNDRGLYETLVGVQDEESGNSGPGNGGFGVLPKLDGVKL
AKLQDDLLDGVHVTYHDLALGGYYSRSSPRRLRYDCESKEGLIYLEASYE
EDGVTIVQNISDLLQVGGGPSAHGPTAGLLRATQGNPVQREAAVSLVFKN
ASIDITCGTKQDAHELVLYFSDIGGFKLARTTPRVQRVIRLPPLKEKTLD
IVAKAPSERPTPGVIAPEAIGNHRASFVTPFERANVSSAAEACHRKGASN
LSSSTTNGPPSPTFSTRFRAGIEAIGKDHATQLSASSGFGLDLTRSLSES
SSCGSSAIDRSAKRSSLQPVVLQRTWGPPTKGRNGGGGRGGNRSDQAEPS
ASVTSSALSRTGPLPQPLPQAKGKKGRSVTPQPQRRPPRLGDSRAVDLEQ
SAERPSSGAGKRTGGSRAAPNIITDTGAGAGGSRTPPGWPNTMNFGRTRG
GTTFEPQRRFVGGKKDSPPRDGQAGTIPKGHDSTFVHNPSDVPLNRRHLF
KSAPTSGNRPEKLRSAGHTYRSAPGDQGEGDMPRTVDTEPSGERYHRNRS
DGDKPSRTPDHSPRAGKPRHSPTTRRGSQVDDPDQEDSTNQPKRRATPKE
LQRPLKEIMRHGTRRRGTVGDTQGKVSPRQHQEKQRRSTLGANPSTSRPS
AAEAKVSMSRDRVQADRKSTNPRDRGNRGLKAENQETHDRSRARSVPRSH
PEAANVASAPALRNDPLLPRRVVVPFHSPQEVFSSALEAQAAAELESPAG
RATGDEGLPGGARRRFGGIERTELVEQADPPPTLSPRVDHRPRANPGGRR
HEDDDNFTTCRVKEGTVGARRHSCEDPRDRASSPFHREGGRRKAIKSLLR
EGGEKLKNFASGGGVLRRDGADKSYEGDMSPSQDAVGGLYRRQIRHGGRF
FSNPRGSVASAVETFTPEVEPTSSGVRNGHSRSPA*
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