prot_H-elongata_contig51386.12400.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51386.12400.1
Unique Nameprot_H-elongata_contig51386.12400.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Match: D8LU44_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU44_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.880e-41
Identity = 77/153 (50.33%), Postives = 103/153 (67.32%), Query Frame = 0
Query:    3 QVILGQWKEDDGSAAGCSNFGRYLDNPRYFATVTSSTRLLMRLAIPEEAGPFPSGRPAINVSLFSAGSTGRGREEA-------------------TEWTPASTLAIASSSKGVYLDSSGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS 136
            QV+ G+W++DDG+AAGC NFGRYLDNPRY  TV S   +L+R+ IPE AGPFP GRPA+N++LF     G G   A                    +  P S LAIASS+ GVY+DSS G+VT++VE+ AG+Y+A+VS++ PQ ADY +T+Y+
Sbjct:  380 QVVRGRWRQDDGTAAGCGNFGRYLDNPRYLFTVPSRASILLRVVIPENAGPFPEGRPAVNITLFPTTREGGGDSTAGPPEDTGGMHRGVGRISLNPKCQPTSNLAIASSNGGVYMDSSAGAVTESVEVEAGEYVAVVSSFRPQKADYEITIYT 532          
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Match: A0A6H5KS09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS09_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.890e-26
Identity = 59/126 (46.83%), Postives = 82/126 (65.08%), Query Frame = 0
Query:   30 RYFATVTSSTRLLMRLAIPEEAGPFPSGRPAINVSLF-----SAGSTGRGREEAT--------------EWTPASTLAIASSSKGVYLDSSGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS 136
            RY  TV S   +L+R+ IPE AGPFP GRPA+N++LF      AG++  G  E T              +  P S LAIASS+ GVY+DSS G+VT++VE+ AG+Y+A+VS++ PQ ADY +T+Y+
Sbjct:   18 RYLFTVPSRASILLRVVIPENAGPFPEGRPAVNITLFPTTREGAGNSSSGPPEDTGGMPRGVGRISLNPKCQPTSNLAIASSNGGVYMDSSAGAVTESVEVEAGEYVAVVSSFRPQEADYEITIYT 143          
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Match: A0A024TNA2_9STRA (Calpain catalytic domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNA2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.260e-13
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    4 VILGQWKEDDGSAAGCSNFGRYLDNPRYFATVTSSTRLLMRLAIPEEAGPFPSGRPAINVSLFSAGSTGRGREEATEWTPASTLAIASSSKGVYLDSSGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS 136
            V  G+W  + G+AAGCSN+G YLDNP++   V ++ +L  RL    + G   S    INVSL+   STG+  +      P  T A  +S+KG Y +S+ G  T A +   G Y+AI ST+ P   D+ L  YS
Sbjct:  871 VCSGKWNVEVGTAAGCSNYGHYLDNPQFLVHVMATCQLFFRL---RQRGAASS---TINVSLYPCTSTGQLHDP--HCNP--TTAFVTSAKGSYTNSACGVRTPAAQFPRGFYLAIPSTFDPHHGDFDLHGYS 993          
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Match: W4G3V3_9STRA (Calpain catalytic domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G3V3_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 3.210e-13
Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 0
Query:    4 VILGQWKEDDGSAAGCSNFGRYLDNPRYFATVTSSTRLLMRLAIPEEAGPFPSGRPAINVSLFSAGSTGRGREEATEWTPASTLAIASSSKGVYLDSSGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS 136
            V  G+W  D G+AAGCSN+G+YL NP+Y   V    +L  RL  P    P      +INVS++    +G    +  + T   T A  +S+KG Y +S+ G  T    +  G Y+ I ST+ P+  D+ L  Y+
Sbjct:  883 VCTGKWNPDAGTAAGCSNYGQYLQNPQYLLHVPVKCQLFFRLRPPRSTLPSEC---SINVSVYECSPSG----QLPDATANPTTAFLTSAKGAYTNSTCGVRTPLAHVPPGYYLVIPSTFEPRRGDFDLHGYA 1008          
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Match: G4ZGX2_PHYSP (Calpain catalytic domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZGX2_PHYSP)

HSP 1 Score: 69.7 bits (169), Expect = 3.330e-11
Identity = 51/143 (35.66%), Postives = 72/143 (50.35%), Query Frame = 0
Query:    5 ILGQWKEDDGSAAGCSNFGRYLDNPRYFATVTSSTRLLMRLAI--------PEEAGPFPSG-RPAINVSLFSAGSTGRGREEATEWTPASTLAIASSSKGVYLDS--SGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS 136
            + G+W    GSAAGCSN+G Y+ NP+Y   VT    +L RL +        P EA     G  P+INVS+F++ S G   +      P    A A+S+ GVY+    SG   T +     G YI + ST+ PQ   Y + +Y+
Sbjct:  836 LRGKWDIQTGSAAGCSNYGCYIFNPKYLVHVTQECDILARLLVLQPEADASPGEATAKEGGVAPSINVSVFASTSEG---DLLLSTNPKQAFAGATSAHGVYVSGAPSGVLATASRRYPPGWYIVLPSTFEPQELHYEIRLYA 975          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51386.12400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LU44_ECTSI1.880e-4150.33Calpain catalytic domain-containing protein n=1 Ta... [more]
A0A6H5KS09_9PHAE1.890e-2646.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A024TNA2_9STRA1.260e-1339.10Calpain catalytic domain-containing protein n=3 Ta... [more]
W4G3V3_9STRA3.210e-1335.34Calpain catalytic domain-containing protein n=3 Ta... [more]
G4ZGX2_PHYSP3.330e-1135.66Calpain catalytic domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022682Peptidase C2, calpain, large subunit, domain IIIPFAMPF01067Calpain_IIIcoord: 7..136
e-value: 1.2E-4
score: 22.3
NoneNo IPR availableGENE3D2.60.120.380coord: 1..136
e-value: 7.7E-14
score: 53.6
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 4..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51386contigH-elongata_contig51386:2112..3169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51386.12400.1mRNA_H-elongata_contig51386.12400.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51386 2112..3169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51386.12400.1 ID=prot_H-elongata_contig51386.12400.1|Name=mRNA_H-elongata_contig51386.12400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MVQVILGQWKEDDGSAAGCSNFGRYLDNPRYFATVTSSTRLLMRLAIPEE
AGPFPSGRPAINVSLFSAGSTGRGREEATEWTPASTLAIASSSKGVYLDS
SGGSVTDAVELAAGDYIAIVSTYSPQAADYVLTVYS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022682Calpain_domain_III
IPR036213Calpain_III_sf