prot_H-elongata_contig5132.12390.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5132.12390.1
Unique Nameprot_H-elongata_contig5132.12390.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
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BLAST of mRNA_H-elongata_contig5132.12390.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 8.050e-67
Identity = 124/247 (50.20%), Postives = 170/247 (68.83%), Query Frame = 0 
Query:    4 IWRCNKCRSWFHASCGQMGLGDAITNDKARDEALCRACSRVTVGST-GKEPGSSVQKQLALIRSKREKMLTLLERELDNGWPEGVFDLTISTE----AGAIR----NARGP--DGNLAAESSGADARGLSAPPCAAEGCERRSRPDSRYCSDGCGVRNAQLLLSGALRHSLEERLGRERGRRLGELREMKARKQEVGTTMKKLYLPRPPVLRRQEAAKLHTIVEKRRRLWKRLLDIGAYWETVTGSR 239
            I RC+KC +W+H SCGQM  GD I++++AR+E LCRAC+R+T+G+  GK+P +++QKQL+L+R KR KML  LER+++ G P GVFDL ++      AG +     NA+GP   GN    + G D R  + PPCAA  C R SR DS++C D CGV +A+  L+ A+RH +EE  G +RGRRL E RE+K RKQ+VG  MKK+  PR P  + +    LH +V +R RLW+RL++IGAYWE V+GSR
Sbjct:  530 IVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRACARITIGAPQGKDPTATLQKQLSLVREKRTKMLEFLERDVETGTPCGVFDLPLNIRDVNTAGGVELKDGNAKGPAAGGNSNGGNGGVDMRD-NRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHGLVARRCRLWQRLIEIGAYWEKVSGSR 775
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BLAST of mRNA_H-elongata_contig5132.12390.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 4.750e-65
Identity = 121/247 (48.99%), Postives = 168/247 (68.02%), Query Frame = 0 
Query:    4 IWRCNKCRSWFHASCGQMGLGDAITNDKARDEALCRACSRVTVGST-GKEPGSSVQKQLALIRSKREKMLTLLERELDNGWPEGVFDLTIS----TEAGAIR----NARGPD--GNLAAESSGADARGLSAPPCAAEGCERRSRPDSRYCSDGCGVRNAQLLLSGALRHSLEERLGRERGRRLGELREMKARKQEVGTTMKKLYLPRPPVLRRQEAAKLHTIVEKRRRLWKRLLDIGAYWETVTGSR 239
            I RC+KC +W+H SCGQM  GD I++++AR+E LCR C+R+ +G+  GK+P +++QKQL+L+R KR KML  LE +++ G P GVFDL ++    + AG +     NA GPD  GN    + G D R  + PPCAA  C R SR DS++C D CGV +A+  L+ A+RH +EE  G +RGRRL E RE+K RKQ+VG  MKK+  PR P  + +    LH +V ++ RLW+RL++IGAYWE V+GSR
Sbjct:  553 IVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRTCARIAIGAPQGKDPTATLQKQLSLVREKRTKMLEFLEEDVETGAPCGVFDLPLNIRDVSTAGGVGPKDGNANGPDAGGNSNGGNGGVDKRD-NRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHALVVRKCRLWQRLIEIGAYWEKVSGSR 798
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5132.12390.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L313_9PHAE8.050e-6750.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA3_ECTSI4.750e-6548.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5132contigH-elongata_contig5132:7317..10884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5132.12390.1mRNA_H-elongata_contig5132.12390.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5132 7317..10885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5132.12390.1 ID=prot_H-elongata_contig5132.12390.1|Name=mRNA_H-elongata_contig5132.12390.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
PEAIWRCNKCRSWFHASCGQMGLGDAITNDKARDEALCRACSRVTVGSTG
KEPGSSVQKQLALIRSKREKMLTLLERELDNGWPEGVFDLTISTEAGAIR
NARGPDGNLAAESSGADARGLSAPPCAAEGCERRSRPDSRYCSDGCGVRN
AQLLLSGALRHSLEERLGRERGRRLGELREMKARKQEVGTTMKKLYLPRP
PVLRRQEAAKLHTIVEKRRRLWKRLLDIGAYWETVTGSRSLSVGRAYWQQ
QQAAEARAAAVLQRTAGTG
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