prot_H-elongata_contig51174.12376.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig51174.12376.1
Unique Nameprot_H-elongata_contig51174.12376.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length140
Homology
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 4.820e-53
Identity = 92/141 (65.25%), Postives = 109/141 (77.30%), Query Frame = 0
Query:    1 MVHTISANARVPDKNTCITNMRDVKKTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLE-ESGVCTHIGCCNHRL 140
            MVH I  +ARVP+K  C+T MR VKK  ME V+ L+EGE +C+T+DGWTSCANDTYM  T  L+T AW+L+TL V C KSE TTTGDALA GIKA VA+HGL GKV A+TTDCE  MVK+GRLL  ++ V T IGCCN+RL
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRL 141          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.800e-24
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   36 LEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            + GE + +T+DGWT  +NDTYM  T   ++  ++L+ L + CKK    T G+ L + +KA +AR+GL G+ +AITTDCE  MVK GRLLEE+   TH+GC  HRL
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRL 105          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 5.330e-18
Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 0
Query:   50 SCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHR 139
            S +NDTYM  T   ++  ++L+ L +  KK    TTG+ L + +KA +AR+GL G+ +A TTDCE FMVK GRLLEE+   +H+GC  HR
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHR 92          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: UPI0020143A6F (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020143A6F)

HSP 1 Score: 61.2 bits (147), Expect = 3.190e-8
Identity = 32/119 (26.89%), Postives = 64/119 (53.78%), Query Frame = 0
Query:   25 KKTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGK---VMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            ++T  + + +L +   + +T DGWTS A  +Y+  T  ++T  WE++  ++  +   ET TG  +A+ +K+AV++ GL+     +  +T +  +  V +     E+G+  H+ C  H L
Sbjct:  100 RETKSKVIETLRKAYSVSITTDGWTSRATQSYLTVTAHVITSEWEMVNFVLQTRPLFETHTGANIAEVLKSAVSKWGLQKANHGIAVVTDNARNMDVAV----REAGLAPHVRCFAHTL 214          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: UPI0018C29829 (zinc finger BED domain-containing protein 4 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C29829)

HSP 1 Score: 57.4 bits (137), Expect = 7.150e-7
Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 0
Query:   15 NTCITNMRDVKKTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            N  I  + +  K T+++   LL+ E++C+TAD WTS AN++Y+  T   +T  +EL T L+ C   +E+ T D +   +   V    L  K+  + TD  +    I R +   G   H GC  H L
Sbjct:  178 NVMIPTLFNKTKETLKT--ELLQIENICLTADLWTSRANESYLAVTGHFITDDYELKTCLLDCSNFQESHTNDNIQTVLIVMVKEWNLTNKINFVITDNAA---NIQRAISNIGW-KHYGCYGHTL 297          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: UPI001ED88F3E (E3 SUMO-protein ligase ZBED1-like n=3 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED88F3E)

HSP 1 Score: 55.1 bits (131), Expect = 4.520e-6
Identity = 39/138 (28.26%), Postives = 64/138 (46.38%), Query Frame = 0
Query:    5 ISANARVPDKNTCITNMRDV--KKTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            ++ N   P + T   N  ++   KT ME    + +     +TADGWTS  ND+Y+  T   +    +L + L+ C    +  T   +AD I   +    L+ KV+A+ +D  + M+   ++L      THI C  H L
Sbjct:  157 LNPNYHPPSRKTLANNYLELLYSKTAMELKEKIKKVTFCSITADGWTSATNDSYLAVTAHFICNG-QLQSALLDCIYFTDRHTATNIADEIHRIIRSWDLDSKVVALISDSAANMLAAAKILGW----THIPCFAHTL 289          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: UPI000B390FEB (zinc finger BED domain-containing protein 4-like n=1 Tax=Helicoverpa armigera TaxID=29058 RepID=UPI000B390FEB)

HSP 1 Score: 53.5 bits (127), Expect = 1.560e-5
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0
Query:   26 KTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLE-GKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            KTT+ S+      E +C+TAD WTS AN++Y+  T   +T  +EL T+L+ C   E++ T + +   +   ++++ L   K+  I TD  +    I R +   G   H GC  H L
Sbjct:  193 KTTLGSI------EHLCLTADLWTSRANESYLAVTGHFITEEFELKTILLDCSNFEDSHTSENIQSVLNDVMSKYELTLNKINFIVTDNAA---NIQRAVTNIGW-KHYGCYGHTL 298          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: A0A6P5VG43_DROOB (zinc finger BED domain-containing protein 1-like n=1 Tax=Drosophila obscura TaxID=7282 RepID=A0A6P5VG43_DROOB)

HSP 1 Score: 52.4 bits (124), Expect = 3.760e-5
Identity = 38/129 (29.46%), Postives = 64/129 (49.61%), Query Frame = 0
Query:   14 KNTCITNMRDVKKTTMESVASLLEGEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKK--SEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            +N  I N  +  KT ++     +E  ++ +TADGWTS AN+ Y+  T   +   ++L + ++S     ++   T   +A+ I+  +   GL  KV+ I TD ++ M K     E  G+ TH  C  H L
Sbjct:   37 RNVAIPNAYEDLKTKLKFALDCVE--NVAITADGWTSMANEGYLTITCHFINSEFQLNSAVLSTTTLINQTNHTAANIAESIRVVLVEWGLVEKVVCIVTDNDASMKKA---CERLGI-THFPCFAHTL 159          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: UPI000811684C (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI000811684C)

HSP 1 Score: 51.2 bits (121), Expect = 7.460e-5
Identity = 38/144 (26.39%), Postives = 71/144 (49.31%), Query Frame = 0
Query:    2 VHTISANARVPDKNTCITNMRDVK-KTTMESVASLL-EGEDMCVTADGWTSCANDTYMPPTVILVTRAWE---LITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL 140
            ++ ++ N ++P + T  T++     K T+E+V + L +   +C+T DGWTS A+D++   T   ++ + E   L + L++C    +  TG+ + + ++      G+  K+  I TD  + M    R     G   H GC  H L
Sbjct:   21 INMLNPNYKLPTRKTLSTSLIPAAYKETLEAVKNRLSKAFAICLTVDGWTSRAHDSFFSVTAHYISESSERTFLASDLITCVSYADRHTGENIKNKLREICDEWGIANKIAVIVTDNAANMKAAVR----DGGWRHWGCFAHTL 160          
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Match: A0A8K0D3Y7_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0D3Y7_9COLE)

HSP 1 Score: 51.2 bits (121), Expect = 9.740e-5
Identity = 32/112 (28.57%), Postives = 61/112 (54.46%), Query Frame = 0
Query:   28 TMESVASLLE-GEDMCVTADGWTSCANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARHGLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNH 138
            T E V + L+  E +C+T DGWTS AN++Y+  T   + +A +L ++L+ C K  ++ T   L++ ++  V    ++ +++A+ +D  + +V   +  E      HI C  H
Sbjct:  152 TKERVFNKLKTAEAICLTTDGWTSVANESYLAVTAHFLNKANDLQSVLLECYKYTDSHTAVNLSEELQRIVENWQIKERIVAVVSDNAANIVAAIKRTEWK----HIPCFAH 259          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig51174.12376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE4.820e-5365.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE1.800e-2448.57Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE5.330e-1847.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0020143A6F3.190e-826.89E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobr... [more]
UPI0018C298297.150e-731.75zinc finger BED domain-containing protein 4 n=1 Ta... [more]
UPI001ED88F3E4.520e-628.26E3 SUMO-protein ligase ZBED1-like n=3 Tax=Ischnura... [more]
UPI000B390FEB1.560e-531.90zinc finger BED domain-containing protein 4-like n... [more]
A0A6P5VG43_DROOB3.760e-529.46zinc finger BED domain-containing protein 1-like n... [more]
UPI000811684C7.460e-526.39zinc finger BED domain-containing protein 1-like n... [more]
A0A8K0D3Y7_9COLE9.740e-528.57Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 30..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig51174contigH-elongata_contig51174:3240..3659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig51174.12376.1mRNA_H-elongata_contig51174.12376.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig51174 3240..3668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig51174.12376.1 ID=prot_H-elongata_contig51174.12376.1|Name=mRNA_H-elongata_contig51174.12376.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
MVHTISANARVPDKNTCITNMRDVKKTTMESVASLLEGEDMCVTADGWTS
CANDTYMPPTVILVTRAWELITLLVSCKKSEETTTGDALADGIKAAVARH
GLEGKVMAITTDCESFMVKIGRLLEESGVCTHIGCCNHRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf