prot_H-elongata_contig50940.12352.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50940.12352.1
Unique Nameprot_H-elongata_contig50940.12352.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig50940.12352.1 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.990e-18
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 MDLIKEFNFLSIGVGGKIHCSLTNRDLPLRVDAIQQHINSKKLKKEREW 49
            MDLIK+F+FLSIG+ GKIHC+LTNRDLPL   A+ QH+NSKKLKKEREW
Sbjct:   26 MDLIKQFDFLSIGLTGKIHCALTNRDLPLNSTAVHQHLNSKKLKKEREW 74
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BLAST of mRNA_H-elongata_contig50940.12352.1 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.730e-18
Identity = 38/49 (77.55%), Postives = 44/49 (89.80%), Query Frame = 0 
Query:    1 MDLIKEFNFLSIGVGGKIHCSLTNRDLPLRVDAIQQHINSKKLKKEREW 49
            MDLIK+F+FLSIG+ GKIHC+LTNRDLPL   A+ QH+NSKKLKKEREW
Sbjct:   26 MDLIKQFDFLSIGLRGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREW 74
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50940.12352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G730_ECTSI1.990e-1877.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNC3_9PHAE2.730e-1877.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50940contigH-elongata_contig50940:3689..3838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50940.12352.1mRNA_H-elongata_contig50940.12352.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50940 3677..3838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50940.12352.1 ID=prot_H-elongata_contig50940.12352.1|Name=mRNA_H-elongata_contig50940.12352.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MDLIKEFNFLSIGVGGKIHCSLTNRDLPLRVDAIQQHINSKKLKKEREW*
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