prot_H-elongata_contig50876.12349.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50876.12349.1
Unique Nameprot_H-elongata_contig50876.12349.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A6H5JC42_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC42_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 9.310e-77
Identity = 112/138 (81.16%), Postives = 120/138 (86.96%), Query Frame = 0
Query:    1 IGGSSARRRRQTISRAALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            I   +ARRRRQ I R ALEARLQL HP IELGRLRLLLVDRDFTGEDYQALLDLDENN VPST GASEGEI+RNPSF++ E   DS+ KPKNC+ICLYPFKP  RVRIIPCLHQFHTECIDPWL+ NAICP+CKFPAV
Sbjct:   97 IRSDTARRRRQRIPRGALEARLQLHHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNDVPSTVGASEGEIKRNPSFVIPEPAADSVVKPKNCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAV 234          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A836CGW1_9STRA (Ubiquitin-protein ligase/ zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 1.490e-42
Identity = 72/139 (51.80%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 IGGSSARRRRQTISRAALEARLQLTHPSIELG-RLRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            + G+ AR   + ++R   E+R+   HP +  G RL LLL+DRDF G+DYQ LL+LD +N  P+  GA+E EIRRNP F ++E+  D+    ++C+ICL+ F     VRI+PCLHQ+H+ECID WL+MNA CPICKFPAV
Sbjct:  108 VAGAGARV--EMVTRTQWESRMLARHPQLANGGRLALLLMDRDFDGDDYQMLLELDADNVAPAAVGATEAEIRRNPCFTVQES--DAKQLARSCSICLHTFCAGEEVRIVPCLHQYHSECIDEWLRMNATCPICKFPAV 242          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A485LC69_9STRA (Aste57867_17819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC69_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.270e-26
Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 0
Query:   24 LTHPSIELGRLRLLL---------VDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGK---PKN--CTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            L HPS    R RLLL          DRDF   DY+ LL LDENN V  + GA++ EI R P   + E+ L S  K   P++  C+ICL      ++ R++PC H+FH +CIDPWLK  A CPICKFPA+
Sbjct:   83 LLHPSTAGERQRLLLSPTEINLLLTDRDFDSNDYEQLLMLDENN-VKKSHGATDVEIDRLPVVTVSESMLQSTNKGGVPEDLKCSICLEDLVVGSQARMVPCFHRFHPQCIDPWLKDKAECPICKFPAI 210          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A5D6XR94_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR94_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.100e-25
Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0
Query:    1 IGGSSARRRRQTISRAALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            + G  ARR ++  ++AA+    +  +  ++   LRLL   RDF   DY+ LL LD      S  GA++ EI+R P     E  L +  +   C+ICL P    A VR++ C H FH +CIDPWLK  A CP+CKFPA+
Sbjct:   55 VQGKRARRGQRVQAQAAVVRISRAIYSQLDTDTLRLLASARDFDERDYERLLQLDSVRD--SDGGATDAEIQRFPLVAFTEQMLQASNR-AGCSICLSPIAVDASVRLLQCFHHFHPDCIDPWLKSKAECPMCKFPAI 189          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A3R7KYN5_9STRA (RING-type domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KYN5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.210e-25
Identity = 52/132 (39.39%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    7 RRRRQTISRAALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            RRRRQ  +R  +    +  +  ++   L++LL +RDF   DY+ L+ L+  N+  S  GA+  +IR+ P   + E+ L++  +  +C +CL  F+  ARVR++PC H+FH +CIDPWL+  A CP+CKFPA+
Sbjct:   62 RRRRQMTARGGVMQMSRAVYEQLDGEILQMLLSNRDFDSNDYERLMRLEALNER-SHDGATVQQIRQLPVISVTESMLEA-SENASCAVCLNAFQVDARVRMMPCFHRFHPDCIDPWLQEKASCPVCKFPAI 191          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: L1IY96_GUITC (RING-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IY96_GUITC)

HSP 1 Score: 100 bits (249), Expect = 1.220e-24
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0
Query:   28 SIELGRLRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICK 134
            +I    LRL L++RDFT  DY+ALL LDE      + GA++  I R P + + E       K   CT+CL P   S + RI+PCLHQFH +CID WL+ N+ CP+CK
Sbjct:   21 NISQDHLRLSLINRDFTSNDYEALLSLDE--AAGRSRGANQDRIDRLPCYTVAEG-----SKAPPCTVCLDPLNVSDQARILPCLHQFHKDCIDRWLRDNSTCPVCK 120          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: W7T4H0_9STRA (Zinc finger, RING-type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4H0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.230e-24
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   17 ALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQALLDLDENNQ-VPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFH-TECIDPWLKMNAICPICKF 135
            A+E  + L+    +  RL+L+L+DRDF+ EDY+ L  LDE+ Q      GA++ E+ R P++++     D+  K   C ICL  F     VRI+PCLHQFH +EC DPWL+    CP+CKF
Sbjct:   85 AVEEGIALSRRGTDSSRLQLMLMDRDFSSEDYEVLSRLDEDEQDACHLLGATDAELERLPTYIV-----DTETKLNKCFICLNDFLKGEVVRILPCLHQFHQSECCDPWLRRKMECPVCKF 200          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A3F2RQ68_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ68_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.390e-23
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 0
Query:   34 LRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            L++LL +RDF   DY+ L+ L+  N+  S  GA+  +IR+ P   + E+ L++  +  +C +CL  F+  ARVR++PC H FH +CIDPWL+  A CP+CKFPA+
Sbjct:   23 LQMLLSNRDFDSNDYERLMRLEALNER-SHDGATVQQIRQLPVISVTESMLEA-SENASCAVCLNAFQVDARVRMMPCFHHFHPDCIDPWLQEKASCPVCKFPAI 125          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: H3GXJ4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXJ4_PHYRM)

HSP 1 Score: 95.9 bits (237), Expect = 4.050e-22
Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   34 LRLLLVDRDFTGEDYQALLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            L+LL+ +RDF   DY+ L+ L+  N+     GAS  +I++ P   + E+ L +  +  +C +CL  F+   RVR++PC H+FH ECIDPWL+  A CP+CKFPA+
Sbjct:   86 LQLLMSNRDFDSNDYERLMRLEALNER-KREGASPHQIQQLPIVTVTESMLQA-SENASCAVCLSTFQLDGRVRMMPCFHRFHQECIDPWLQEKASCPVCKFPAI 188          
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Match: A0A7S2EWT1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWT1_TRICV)

HSP 1 Score: 96.3 bits (238), Expect = 5.340e-22
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 0
Query:    8 RRRQTISRAALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQALLDLDENN-----QVPSTAGASEGEIRRNPSFLLKEAPLD-------SMGK----------PKNCTICLYPFKPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV 138
            RRR+ I R     R       I    L L+L  RDFTG+DY+ LL  ++ +        +T GA+E EI R P  ++  A  D       S G+          P++C ICL  ++ S  VR +PCLH FH  CIDPWL+  A CP+CK  AV
Sbjct:   63 RRREAILRRVNARRTANGEQPISAESLGLVLSGRDFTGDDYERLLRFNDESGPALESAAATVGATEAEITRCPRRIISSAGDDLISGRTRSAGEAAAASGGTRGPRSCPICLEQYQISEEVRTLPCLHTFHCNCIDPWLRQKAECPVCKQSAV 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50876.12349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC42_9PHAE9.310e-7781.16RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CGW1_9STRA1.490e-4251.80Ubiquitin-protein ligase/ zinc ion binding protein... [more]
A0A485LC69_9STRA6.270e-2646.51Aste57867_17819 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XR94_9STRA2.100e-2539.86RING-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A3R7KYN5_9STRA2.210e-2539.39RING-type domain-containing protein n=2 Tax=Phytop... [more]
L1IY96_GUITC1.220e-2445.79RING-type domain-containing protein n=1 Tax=Guilla... [more]
W7T4H0_9STRA2.230e-2442.98Zinc finger, RING-type n=2 Tax=Nannochloropsis gad... [more]
A0A3F2RQ68_9STRA1.390e-2343.81RING-type domain-containing protein n=1 Tax=Phytop... [more]
H3GXJ4_PHYRM4.050e-2242.86RING-type domain-containing protein n=1 Tax=Phytop... [more]
A0A7S2EWT1_TRICV5.340e-2237.91Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 93..133
e-value: 3.4E-7
score: 39.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 92..134
e-value: 2.0E-12
score: 47.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 93..134
score: 12.504
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 53..137
e-value: 3.0E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR45931:SF3E3 UBIQUITIN-PROTEIN LIGASE RHY1A-RELATEDcoord: 8..137
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 8..137
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 92..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50876contigH-elongata_contig50876:99..1881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50876.12349.1mRNA_H-elongata_contig50876.12349.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50876 99..1881 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50876.12349.1 ID=prot_H-elongata_contig50876.12349.1|Name=mRNA_H-elongata_contig50876.12349.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
IGGSSARRRRQTISRAALEARLQLTHPSIELGRLRLLLVDRDFTGEDYQA
LLDLDENNQVPSTAGASEGEIRRNPSFLLKEAPLDSMGKPKNCTICLYPF
KPSARVRIIPCLHQFHTECIDPWLKMNAICPICKFPAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD